Detailed information NTG0091965

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCV36_RS02980
• Genome accession: NZ_AP025483
• Coordinates: 618422..621811 (-)
• Length: 1129 a.a.
• NCBI ID: WP_135457120.1
• Uniprot ID: -
• Organism: Vibrio echinoideorum strain DSM 107264
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 613422..626811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV36_RS02965	-	613847..614872 (-)	1026	WP_017073098.1	ABC transporter permease	-
OCV36_RS02970	-	614875..615861 (-)	987	WP_017073097.1	ABC transporter permease	-
OCV36_RS02975	-	616031..617713 (-)	1683	WP_135457122.1	ABC transporter substrate-binding protein	-
OCV36_RS02980	chiS	618422..621811 (-)	3390	WP_135457120.1	response regulator	Regulator
OCV36_RS02985	rsmC	622028..623050 (-)	1023	WP_135457118.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCV36_RS02990	-	623161..624246 (-)	1086	WP_017073093.1	AI-2E family transporter	-
OCV36_RS02995	hemL	624578..625873 (-)	1296	WP_017073091.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCV36_RS03000	erpA	626170..626511 (+)	342	WP_029224783.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127448.08 Da
• Isoelectric Point: 5.4209

>NTDB_id=91965 OCV36_RS02980 WP_135457120.1 618422..621811(-) (chiS) [Vibrio echinoideorum strain DSM 107264]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESTSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNIAYSVFKHDDYGTNLLTGKYKDSNLGLTFQRLAKDVTDRRRSNEDYTPVIVSDFKDEDGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADVNKRSNIQTLLVGDDHLPRSLAHSQESINLSLDVVNKALAGETAVGTFNNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIRSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATNLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPVATQQELDSYNESGNYSHFQAPDLIDNSQQENSIISEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPRTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=91965 OCV36_RS02980 WP_135457120.1 618422..621811(-) (chiS) [Vibrio echinoideorum strain DSM 107264]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATATTTTTCCTCCAATCGCACAGTCAGGACCTTCAGGAACAAAGTACCTCACACCTTGTTT
CCGTTCGTGATACTAAGCAACAGCAAATTGTCGATTATCTACAAGCTCAAGAGTCTCAAGTGATGGGCTTTGTGCGTTCA
GAACTCGCCAATGCCAGTGGTGGGCGATTTTACGGCTTAATCAATGCCTTCCAACGACTTGGTTTAGATATTGACGAAGC
ACGCAGTAATGCGCAGCAGCGCTACATTCAAGGTTCTGGCGATCAAATAAAAACATCGATTCTTCCAGAGTCCACCAGTT
TTATTGGCAGCGAGCGTTATCGTCTACTGCACAAGCGCTACCATAATGCCTACTTAGAGCTGCTTAAACGCTCCGATTTT
GACGATATTTTATTAGTCGATATCAATGGCAATATCGCTTACTCAGTCTTTAAGCATGATGACTACGGCACCAACTTATT
AACCGGCAAATACAAAGATTCAAACCTAGGCCTGACGTTTCAACGACTAGCAAAAGACGTGACCGATAGACGTAGATCTA
ACGAAGATTACACGCCCGTTATTGTCTCTGACTTCAAAGACGAAGACGGAAAACAAACCGCATGGCTTGGTGCGCCAATC
GTACAACAAGGTTACTTACACAGTTATGCGATGTTTAGACTTCCGATTAACGGCATTACTAAGCTGATTGCCGACGTAAA
TAAGCGTTCAAACATTCAGACGTTATTGGTCGGTGACGATCACTTGCCCCGTAGCCTCGCGCATTCACAAGAGTCGATCA
ATTTAAGCTTAGATGTTGTTAATAAAGCACTTGCAGGTGAAACAGCCGTTGGGACATTCAACAACACTCAAGATCAAGCG
ATCATCGCGGCATACACTCCTATTGAACTAAAATATGCGACATGGGCTTTGGTCGTGGAGCTTCCAGAGAAAGAAGCTTT
TGCTCGTATTCATCAGCTAGAAAAGATCTTCGTGATCGTAATGCTAACAGCGATCATTCTTGTGTTTGTCGCATCACATT
ATCTGTCCAATTTCATCACTTCCCCTCTCCTCAAGCTCACGTGGGCTGCCGAGAAAGTCTCTGCAGGTGATCTTGACGAA
ACCATGATTAATACCGAACGCAAAGACGAAATAGGCCGCTTAGCCGTCAGCTTTGAACGGATGCAGCGTTCGATTCGCGA
AAAAATGCAGCTAATTAGAAGCCAAAATGATGAGCTTGAGGACAACCTAAAGACCATTCAAAAGCAAAACGAAGAGCTGC
AGTTGGCCAACAAGCTTAAAGATGAGTTCTTAGCAACGACCTCACATGAACTAAGAACACCGCTACATGGCATGGTTGGT
ATTGCTGAAGCGCTAATATCCGGCGCAAATGGCCCTATTCCTGCTAATCAGAAATACCAACTGGATATCATCATCAATAG
TGGACAGAGATTGGCAACACTGGTTGATGACCTGCTTGATTACCATAAAATGCGTTATGGCAGCTTGGACATTAAAAAGT
CTGCCGTTGATTTGTCTGCCGCCACCAACTTGGTTCTTGAGCTTTCTCATCACCTATTAGGTAACAAGCCAATCCGCATC
ATTAACCAAGTGCCAAGTGATTTAGGCCTAGTTTCATCGGACCCTCAACGACTTGAGCAAGTGATGTATAACTTGGTTGG
TAATGCCATCAAGTACACATCCGAAGGTAAGATTGTTATCTCAGCAAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TCGATACAGGCCAAGGAATACCGGCAGAGTACCTTGAACATATCTTTGAACCACTGATTCAAGCTGGCCAAGATGCCAGT
AACTACCGCCAAGGTGCAGGGCTTGGGTTATCTATTAGCCGTCAGCTGATTGAGCTAATGGGAGGTTCACTGTACGTGAG
TAGCCAGCCAATGCTAGGCACGACTTTCAGCTTTACTCTGCCTGTAGCTACCCAACAAGAACTGGATAGCTATAACGAGT
CTGGAAACTACTCACACTTCCAAGCGCCAGATTTGATAGATAATAGCCAACAAGAAAACAGCATTATCAGTGAAGATCCT
AATGGTCCATTATTAGTTATCGCTGATGATGAGCCAGTCAACCTGCGCGTATTAGACAGCTTCTTGAAATTAGAAGGTTA
TCGAGTTCGTACCGCATGTGATGGCCCAGAAACCATTGAACTGATTGAAAAAGAGAAACCAGAATTACTGTTACTCGACA
TCATGATGCCAGGTATGAGTGGTTATCAGGTTTGTGAAGCGCTACGTAAGCAATATGATCACGCACAATTGCCAATCATC
ATGCTTACGGCATTGAACCAAGCAGAAGACCGAGTACGAGGCTTCGAAGCGGGTGCCAATGACTACTTATCCAAGCCATT
TAATAAACAAGAACTTGCAGCTCGAATCACAGCGCACTTATCGGCAAGTAAAGCCGAGCAAAGGCGTCTTGAGAATGACC
AACTGCAATTAGAGCTCAAACATAGAGCCATGGTTGAGGCCAACCTGTTAGAAACTCAAGGACGCTTGCTAGAACAGTTG
GAGTCAGCTCCAGAGGCGATCATCTGTATTCGAGATGACCAACGTATTCGATTTGCAAACGAAGCGGCTGCTAAGCTATT
TAGACGCGGACAAGAACAACTTAAGCGTTCAATGGCCGACGAGATCATCGCACCTAAATACCTTAAAGTGGAACAAGCCC
ACTACTGTGGTGATATTGATATCTACATAGATGACACACGTCAGCGCATTCCAAGTGACATCCTCAAGCTACCTGAAGGC
TCAGGGCTCGATACCATGTATATCTTCAATGTGGGTGGTGGCGTTAACTCAAACCGAGTTAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTGCAACAACTGAAGGAGCTTGGTGGTGAATTTACTC
GTCTTGCTGATAAGGCAACCGGTGAAGGTAAAAACAAACAAGAGCTGATGCGTGAAGTATTAGTCGATGTCATGACCAAT
GCCATTATCTACTGGGAGTCTGTTACAGGGGAAACCAAGTTTGCTTTCGCAGAGAAAAGTGGCTTGTGGCGAGTCTATTT
AGACCGCAGCACACTTCAAACTCGAACCTTAGATAAGTACCTTCGTGTAGAAACACTACCAAGAACGCCTCGCTGGAGAA
CGGTATTGAGCTCTATTGAGTTTATTCTCGAACATTGTAAAGAGCAGACCCCCGAAAGAACTCATATCGAGATGCTAAGG
GATAAACTGCAGAAATTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (880-914)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.731	100	0.757