Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | U9S59_RS15220 | Genome accession | NZ_CP141809 |
| Coordinates | 3347022..3348323 (+) | Length | 433 a.a. |
| NCBI ID | WP_009893082.1 | Uniprot ID | Q2T1C5 |
| Organism | Burkholderia thailandensis strain 2022DZh | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3342022..3353323
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U9S59_RS15185 (U9S59_15185) | - | 3342593..3343207 (+) | 615 | WP_025369612.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| U9S59_RS15190 (U9S59_15190) | pth | 3343321..3343926 (+) | 606 | WP_009893073.1 | aminoacyl-tRNA hydrolase | - |
| U9S59_RS15195 (U9S59_15195) | hisC | 3344000..3345067 (+) | 1068 | WP_011401783.1 | histidinol-phosphate transaminase | - |
| U9S59_RS15200 (U9S59_15200) | - | 3345201..3345464 (-) | 264 | WP_009893077.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| U9S59_RS15205 (U9S59_15205) | coaD | 3345529..3346029 (-) | 501 | WP_004195249.1 | pantetheine-phosphate adenylyltransferase | - |
| U9S59_RS15210 (U9S59_15210) | rsmD | 3346138..3346764 (-) | 627 | WP_324657269.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| U9S59_RS15215 (U9S59_15215) | - | 3346844..3347038 (-) | 195 | WP_223297025.1 | hypothetical protein | - |
| U9S59_RS15220 (U9S59_15220) | pilA | 3347022..3348323 (+) | 1302 | WP_009893082.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| U9S59_RS15225 (U9S59_15225) | maiA | 3348481..3349125 (-) | 645 | WP_324657270.1 | maleylacetoacetate isomerase | - |
| U9S59_RS15230 (U9S59_15230) | nirB | 3349518..3351962 (+) | 2445 | WP_009893095.1 | nitrite reductase large subunit NirB | - |
| U9S59_RS15235 (U9S59_15235) | nirD | 3352038..3352433 (+) | 396 | WP_324657271.1 | nitrite reductase small subunit NirD | - |
Sequence
Protein
Download Length: 433 a.a. Molecular weight: 45283.62 Da Isoelectric Point: 5.3487
>NTDB_id=919647 U9S59_RS15220 WP_009893082.1 3347022..3348323(+) (pilA) [Burkholderia thailandensis strain 2022DZh]
MFSFFKRFKKAPDAAPAEPQQAPDAPQDAAGESAAPEAASKAARVDAPAAPVSRGEYSEAPATERPRSDAPAPVRATPPV
SPAAATPESPAGQPSAAEAARAPSVVMTVTPAANGRNGVVETVEIVPPPAPEPAAKKSWIARLKSGLAKTSSSITNVFVN
TKIDDALYEELETALLMSDAGVDATEHLLGALREKVRTGRLTDPQQVKDALRGLLVELLTPLEQSLVLGRAQPLVMMIAG
VNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVSAARARNIDVMMA
DTAGRLPTQLHLMEELRKVKRVIGKAHDGAPHEVLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIA
RQRPIPVYFIGVGEKVEDLQPFSAEEFADALLG
MFSFFKRFKKAPDAAPAEPQQAPDAPQDAAGESAAPEAASKAARVDAPAAPVSRGEYSEAPATERPRSDAPAPVRATPPV
SPAAATPESPAGQPSAAEAARAPSVVMTVTPAANGRNGVVETVEIVPPPAPEPAAKKSWIARLKSGLAKTSSSITNVFVN
TKIDDALYEELETALLMSDAGVDATEHLLGALREKVRTGRLTDPQQVKDALRGLLVELLTPLEQSLVLGRAQPLVMMIAG
VNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVSAARARNIDVMMA
DTAGRLPTQLHLMEELRKVKRVIGKAHDGAPHEVLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIA
RQRPIPVYFIGVGEKVEDLQPFSAEEFADALLG
Nucleotide
Download Length: 1302 bp
>NTDB_id=919647 U9S59_RS15220 WP_009893082.1 3347022..3348323(+) (pilA) [Burkholderia thailandensis strain 2022DZh]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAGCGCCCGACGCCGCACCGGCCGAGCCGCAGCAAGCGCCCGACGCGCCGCA
GGACGCGGCCGGCGAGTCGGCCGCGCCCGAGGCCGCGTCCAAGGCCGCGCGAGTCGACGCGCCCGCTGCGCCGGTCTCGC
GCGGCGAGTACAGCGAAGCGCCGGCTACCGAACGGCCCCGTTCCGACGCGCCGGCCCCCGTTCGCGCGACACCGCCCGTC
TCCCCCGCAGCAGCGACGCCGGAATCGCCGGCCGGGCAGCCGTCCGCCGCCGAAGCGGCGCGCGCGCCGTCCGTCGTGAT
GACGGTGACGCCGGCCGCCAACGGCCGCAACGGCGTCGTCGAGACGGTCGAGATCGTGCCGCCGCCCGCGCCCGAGCCGG
CCGCGAAGAAATCGTGGATCGCGCGGCTGAAGTCCGGCCTCGCGAAGACGAGCTCGAGCATCACGAACGTGTTCGTGAAC
ACGAAGATCGACGACGCGCTCTACGAGGAGCTCGAGACGGCGCTGCTGATGTCCGACGCCGGCGTCGACGCGACCGAGCA
TCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCACGGGCCGCCTCACCGATCCGCAACAGGTGAAGGACGCGCTGCGCGGCC
TGCTCGTCGAGTTGCTGACGCCGCTCGAGCAGTCGCTCGTGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCGCGGGC
GTGAACGGCGCGGGCAAGACGACGAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGATCAATCGGTGCTGCTCGC
CGCCGGCGACACATTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGCGAGCGCAACAACGTGACCGTCGTCCAGC
AGGAAAGCGGCGATCCGGCCGCGGTGATTTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAACATCGACGTGATGATGGCC
GACACCGCGGGCCGCCTGCCGACGCAGCTGCATCTGATGGAAGAGCTCCGGAAGGTGAAGCGCGTGATCGGCAAGGCGCA
CGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCGCGCAGGTGAAGGCCTTCG
ACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGCATCCTCGCCGCGATCGCG
CGCCAGCGGCCGATTCCGGTGTACTTCATCGGCGTCGGCGAGAAGGTCGAGGATCTGCAGCCGTTCAGCGCGGAGGAATT
CGCGGACGCGCTGCTCGGATAA
ATGTTCAGCTTCTTCAAACGATTCAAGAAAGCGCCCGACGCCGCACCGGCCGAGCCGCAGCAAGCGCCCGACGCGCCGCA
GGACGCGGCCGGCGAGTCGGCCGCGCCCGAGGCCGCGTCCAAGGCCGCGCGAGTCGACGCGCCCGCTGCGCCGGTCTCGC
GCGGCGAGTACAGCGAAGCGCCGGCTACCGAACGGCCCCGTTCCGACGCGCCGGCCCCCGTTCGCGCGACACCGCCCGTC
TCCCCCGCAGCAGCGACGCCGGAATCGCCGGCCGGGCAGCCGTCCGCCGCCGAAGCGGCGCGCGCGCCGTCCGTCGTGAT
GACGGTGACGCCGGCCGCCAACGGCCGCAACGGCGTCGTCGAGACGGTCGAGATCGTGCCGCCGCCCGCGCCCGAGCCGG
CCGCGAAGAAATCGTGGATCGCGCGGCTGAAGTCCGGCCTCGCGAAGACGAGCTCGAGCATCACGAACGTGTTCGTGAAC
ACGAAGATCGACGACGCGCTCTACGAGGAGCTCGAGACGGCGCTGCTGATGTCCGACGCCGGCGTCGACGCGACCGAGCA
TCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCACGGGCCGCCTCACCGATCCGCAACAGGTGAAGGACGCGCTGCGCGGCC
TGCTCGTCGAGTTGCTGACGCCGCTCGAGCAGTCGCTCGTGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCGCGGGC
GTGAACGGCGCGGGCAAGACGACGAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGATCAATCGGTGCTGCTCGC
CGCCGGCGACACATTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGCGAGCGCAACAACGTGACCGTCGTCCAGC
AGGAAAGCGGCGATCCGGCCGCGGTGATTTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAACATCGACGTGATGATGGCC
GACACCGCGGGCCGCCTGCCGACGCAGCTGCATCTGATGGAAGAGCTCCGGAAGGTGAAGCGCGTGATCGGCAAGGCGCA
CGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCGCGCAGGTGAAGGCCTTCG
ACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGCATCCTCGCCGCGATCGCG
CGCCAGCGGCCGATTCCGGTGTACTTCATCGGCGTCGGCGAGAAGGTCGAGGATCTGCAGCCGTTCAGCGCGGAGGAATT
CGCGGACGCGCTGCTCGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
50.227 |
100 |
0.51 |