Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   AB2M34_RS21525 Genome accession   NZ_CP161903
Coordinates   4033220..4034047 (-) Length   275 a.a.
NCBI ID   WP_041338386.1    Uniprot ID   -
Organism   Bacillus subtilis strain DYJ24     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 4028220..4039047
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M34_RS21500 (AB2M34_21500) abrB 4030566..4030856 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  AB2M34_RS21505 (AB2M34_21505) rsmI 4030905..4031783 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  AB2M34_RS21510 (AB2M34_21510) yazA 4031758..4032057 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  AB2M34_RS21515 (AB2M34_21515) trmNF 4032044..4032787 (-) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  AB2M34_RS21520 (AB2M34_21520) yabA 4032846..4033205 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  AB2M34_RS21525 (AB2M34_21525) yaaT 4033220..4034047 (-) 828 WP_041338386.1 competence/sporulation regulator complex protein RicT Regulator
  AB2M34_RS21530 (AB2M34_21530) holB 4034050..4035039 (-) 990 WP_129134153.1 DNA polymerase III subunit delta' -
  AB2M34_RS21535 (AB2M34_21535) yaaR 4035051..4035491 (-) 441 WP_009966249.1 YaaR family protein -
  AB2M34_RS21540 (AB2M34_21540) darA 4035504..4035833 (-) 330 WP_088272133.1 cyclic di-AMP receptor DarA -
  AB2M34_RS21545 (AB2M34_21545) tmk 4035907..4036545 (-) 639 WP_015253015.1 dTMP kinase -
  AB2M34_RS21550 (AB2M34_21550) efpO 4036542..4037984 (-) 1443 WP_129134152.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31247.11 Da        Isoelectric Point: 4.7741

>NTDB_id=919580 AB2M34_RS21525 WP_041338386.1 4033220..4034047(-) (yaaT) [Bacillus subtilis strain DYJ24]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=919580 AB2M34_RS21525 WP_041338386.1 4033220..4034047(-) (yaaT) [Bacillus subtilis strain DYJ24]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGATGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGAGATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTATGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.273

100

0.993