Detailed information NTG0919482

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB2M34_RS08630
• Genome accession: NZ_CP161903
• Coordinates: 1629533..1630660 (+)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DYJ24
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1624533..1635660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2M34_RS08600 (AB2M34_08600)	-	1624690..1625169 (-)	480	WP_250622332.1	hypothetical protein	-
AB2M34_RS08605 (AB2M34_08605)	cdiI	1625274..1625633 (-)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
AB2M34_RS08610 (AB2M34_08610)	-	1625730..1626182 (-)	453	WP_014480333.1	SMI1/KNR4 family protein	-
AB2M34_RS08615 (AB2M34_08615)	-	1626281..1626721 (-)	441	WP_014480332.1	SMI1/KNR4 family protein	-
AB2M34_RS08620 (AB2M34_08620)	-	1627124..1627411 (-)	288	WP_014480331.1	hypothetical protein	-
AB2M34_RS08625 (AB2M34_08625)	-	1627425..1629351 (-)	1927	Protein_1690	ribonuclease YeeF family protein	-
AB2M34_RS08630 (AB2M34_08630)	rapC	1629533..1630660 (+)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
AB2M34_RS08635 (AB2M34_08635)	-	1631400..1631795 (-)	396	WP_046160622.1	VOC family protein	-
AB2M34_RS08640 (AB2M34_08640)	-	1632737..1633627 (-)	891	WP_014480326.1	LysR family transcriptional regulator	-
AB2M34_RS08645 (AB2M34_08645)	fumC	1633794..1635182 (+)	1389	WP_014480325.1	class II fumarate hydratase	-
AB2M34_RS08650 (AB2M34_08650)	-	1635401..1635613 (+)	213	Protein_1695	recombinase family protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=919482 AB2M34_RS08630 WP_014480328.1 1629533..1630660(+) (rapC) [Bacillus subtilis strain DYJ24]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=919482 AB2M34_RS08630 WP_014480328.1 1629533..1630660(+) (rapC) [Bacillus subtilis strain DYJ24]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397