Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   AB2M34_RS05455 Genome accession   NZ_CP161903
Coordinates   1034295..1035158 (+) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain DYJ24     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1029295..1040158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M34_RS05425 (AB2M34_05425) pncA 1029760..1030311 (+) 552 WP_014480709.1 cysteine hydrolase family protein -
  AB2M34_RS05430 (AB2M34_05430) pncB 1030327..1031799 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  AB2M34_RS05435 (AB2M34_05435) pdeH 1031935..1033164 (+) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  AB2M34_RS05440 (AB2M34_05440) - 1033140..1033508 (-) 369 WP_050258610.1 hypothetical protein -
  AB2M34_RS05445 (AB2M34_05445) - 1033623..1033748 (-) 126 WP_003228793.1 hypothetical protein -
  AB2M34_RS05450 (AB2M34_05450) degQ 1033970..1034110 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AB2M34_RS05455 (AB2M34_05455) comQ 1034295..1035158 (+) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  AB2M34_RS05460 (AB2M34_05460) comX 1035160..1035381 (+) 222 WP_014480704.1 competence pheromone ComX -
  AB2M34_RS05465 (AB2M34_05465) comP 1035397..1037709 (+) 2313 WP_103330147.1 sensor histidine kinase Regulator
  AB2M34_RS05470 (AB2M34_05470) comA 1037790..1038434 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  AB2M34_RS05475 (AB2M34_05475) yuxO 1038453..1038833 (+) 381 WP_069837723.1 hotdog fold thioesterase -
  AB2M34_RS05480 (AB2M34_05480) mnhG 1038872..1039246 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  AB2M34_RS05485 (AB2M34_05485) mrpF 1039230..1039514 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AB2M34_RS05490 (AB2M34_05490) mrpE 1039514..1039990 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=919463 AB2M34_RS05455 WP_014480705.1 1034295..1035158(+) (comQ) [Bacillus subtilis strain DYJ24]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=919463 AB2M34_RS05455 WP_014480705.1 1034295..1035158(+) (comQ) [Bacillus subtilis strain DYJ24]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439