Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AB2M34_RS04650 Genome accession   NZ_CP161903
Coordinates   884755..885480 (+) Length   241 a.a.
NCBI ID   WP_014480811.1    Uniprot ID   -
Organism   Bacillus subtilis strain DYJ24     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 879755..890480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2M34_RS04630 (AB2M34_04630) - 880472..881806 (+) 1335 WP_087614701.1 glutathionylspermidine synthase family protein -
  AB2M34_RS04635 (AB2M34_04635) - 881806..882330 (+) 525 WP_014480814.1 GNAT family N-acetyltransferase -
  AB2M34_RS04640 (AB2M34_04640) - 882314..883561 (+) 1248 WP_129134384.1 MFS transporter -
  AB2M34_RS04645 (AB2M34_04645) - 883591..884697 (+) 1107 WP_014480812.1 methyltransferase -
  AB2M34_RS04650 (AB2M34_04650) pptA 884755..885480 (+) 726 WP_014480811.1 ABC transporter ATP-binding protein Regulator
  AB2M34_RS04655 (AB2M34_04655) - 885477..886673 (+) 1197 WP_029318434.1 ABC transporter permease -
  AB2M34_RS04660 (AB2M34_04660) - 886928..887056 (+) 129 WP_014480809.1 hypothetical protein -
  AB2M34_RS04665 (AB2M34_04665) - 888304..889224 (+) 921 Protein_926 oligoendopeptidase -
  AB2M34_RS04670 (AB2M34_04670) istB 889267..890025 (-) 759 WP_014479891.1 IS21-like element helper ATPase IstB -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 27577.45 Da        Isoelectric Point: 7.9039

>NTDB_id=919461 AB2M34_RS04650 WP_014480811.1 884755..885480(+) (pptA) [Bacillus subtilis strain DYJ24]
MLRVEQVTGGYKRNKMANHNISFQIDKGEIVGLVGLNGAGKSTIIKHILGILKPTEGRVTLDGVSLRDDPSYFRPRISYI
PEVPQLYQELTLWEHLEFTASAYKMKREKFELKAAELLKKFRMEKKINDYPQTFSKGMQQKVMILCAFLVEAVFFIIDEP
FVGLDPLAIDTLIDLMVEMKQRGMGILVSTHILTMAEKYCDRVVFLHEGKVKVQGTIQEIQDQMKMNDVSLEEMFIGVVK
N

Nucleotide


Download         Length: 726 bp        

>NTDB_id=919461 AB2M34_RS04650 WP_014480811.1 884755..885480(+) (pptA) [Bacillus subtilis strain DYJ24]
ATGTTGCGCGTAGAACAGGTTACAGGAGGTTATAAGCGTAATAAGATGGCAAACCACAATATTTCTTTTCAGATTGATAA
AGGGGAAATAGTTGGTTTAGTTGGGCTAAATGGTGCGGGGAAAAGCACGATCATTAAGCACATCTTAGGTATCTTAAAAC
CCACTGAAGGCCGTGTTACACTTGATGGTGTGTCATTAAGAGATGATCCCTCCTATTTTAGGCCGCGTATTTCCTATATC
CCTGAAGTTCCTCAATTATATCAAGAATTAACTCTTTGGGAACATTTGGAATTCACTGCATCAGCTTATAAAATGAAAAG
AGAAAAATTCGAATTAAAAGCGGCCGAACTGTTAAAAAAATTTAGAATGGAAAAAAAAATAAATGATTACCCGCAGACTT
TTTCGAAGGGGATGCAACAAAAGGTTATGATTCTTTGTGCCTTCTTGGTTGAAGCAGTTTTCTTTATTATTGATGAACCC
TTTGTTGGGCTAGACCCTTTAGCAATTGATACATTAATTGATTTAATGGTTGAAATGAAACAGAGGGGAATGGGAATCCT
TGTTTCTACTCATATTTTAACTATGGCTGAAAAATATTGTGACCGTGTTGTTTTCTTACATGAGGGAAAGGTTAAGGTGC
AAGGAACCATTCAGGAAATTCAAGATCAGATGAAAATGAATGATGTTTCATTAGAAGAAATGTTTATTGGGGTTGTGAAA
AATTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

48.548

100

0.485
  pptA Streptococcus thermophilus LMD-9

48.548

100

0.485