Detailed information NTG0919416

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: VA243_RS06790
• Genome accession: NZ_CP141774
• Coordinates: 1402301..1403614 (+)
• Length: 437 a.a.
• NCBI ID: WP_324714594.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain P07353
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1397301..1408614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VA243_RS06770	crdR	1397627..1398268 (+)	642	WP_001169801.1	copper response regulator transcription factor CrdR	-
VA243_RS06775	crdS	1398234..1399436 (+)	1203	WP_220855492.1	copper-sensing histidine kinase CrdS	-
VA243_RS06780	-	1399439..1400833 (+)	1395	WP_324714592.1	NAD(P)H-hydrate dehydratase	-
VA243_RS06785	-	1400844..1402304 (+)	1461	WP_324714593.1	replicative DNA helicase	-
VA243_RS06790	comEC/comE3	1402301..1403614 (+)	1314	WP_324714594.1	ComEC/Rec2 family competence protein	Machinery gene
VA243_RS06795	mqnP	1403685..1404527 (+)	843	WP_231171274.1	menaquinone biosynthesis prenyltransferase MqnP	-
VA243_RS06800	-	1404520..1405014 (+)	495	WP_001867294.1	hypothetical protein	-
VA243_RS06805	-	1405027..1405530 (+)	504	WP_000953083.1	DUF6115 domain-containing protein	-
VA243_RS06810	-	1405527..1406330 (+)	804	WP_324714595.1	phosphatidylserine decarboxylase	-
VA243_RS06815	nadA	1406320..1407330 (+)	1011	WP_324714596.1	quinolinate synthase NadA	-
VA243_RS06820	nadC	1407330..1408151 (+)	822	WP_324714597.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50127.12 Da
• Isoelectric Point: 9.7741

>NTDB_id=919416 VA243_RS06790 WP_324714594.1 1402301..1403614(+) (comEC/comE3) [Helicobacter pylori strain P07353]
MKDKTFQGAFELLTTPKEYLLCGVILSLLLALNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWHHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFIFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQVISLS
ALIFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLILHAVGLGSLLDSILNMPLTIPTISVFSPLWLLGVHLFLT
ILSVRFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=919416 VA243_RS06790 WP_324714594.1 1402301..1403614(+) (comEC/comE3) [Helicobacter pylori strain P07353]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTGTTGTGTGGGGTTATTTTAAG
CCTTTTGTTAGCGCTCAATCTTTATTTAGAATACCTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTACGCGCAATTTTTTGGCAAAATCAAACCTTGCTC
GTTCTTAGAGTCTTTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAAGATTTCAAATCGCATT
GGCACCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGAGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGTGCGAGCGTGTATTTTATTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTAGATTTTTTACCTTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAGCACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAGGTCATAAGCTTAAGC
GCGCTAATTTTTTTGAACATGCTCATCATTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTAATCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATAGCA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTATGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTCTAAGTGTGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-411)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.737	100	0.947