Detailed information NTG0919411

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: VA243_RS06160
• Genome accession: NZ_CP141774
• Coordinates: 1273521..1274954 (-)
• Length: 477 a.a.
• NCBI ID: WP_324714501.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain P07353
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1268521..1279954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VA243_RS06135	recG	1269661..1271526 (-)	1866	WP_324714499.1	ATP-dependent DNA helicase RecG	-
VA243_RS06140	-	1271608..1271955 (+)	348	WP_000837036.1	hypothetical protein	-
VA243_RS06145	-	1271959..1272594 (+)	636	WP_000668030.1	outer membrane protein	-
VA243_RS06150	-	1272591..1273343 (-)	753	WP_000767501.1	exodeoxyribonuclease III	-
VA243_RS06160	comH	1273521..1274954 (-)	1434	WP_324714501.1	competence protein	Machinery gene
VA243_RS06165	dnaA	1275176..1276543 (-)	1368	WP_324714502.1	chromosomal replication initiator protein DnaA	-
VA243_RS06170	-	1276695..1277237 (+)	543	WP_324714504.1	purine-nucleoside phosphorylase	-
VA243_RS06175	-	1277271..1277510 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
VA243_RS06180	glmS	1277511..1279304 (+)	1794	WP_324714505.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54709.60 Da
• Isoelectric Point: 6.9524

>NTDB_id=919411 VA243_RS06160 WP_324714501.1 1273521..1274954(-) (comH) [Helicobacter pylori strain P07353]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESQQMPSLNAPIQKPQNKPTSSQQSLQNFPYTESKLGFKNPKNSLLQPLAT
PNKLSSANEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNANINEHNESNENRDNGEKQAIRDPNIKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITHNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=919411 VA243_RS06160 WP_324714501.1 1273521..1274954(-) (comH) [Helicobacter pylori strain P07353]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCAACAAATGCCTTCTTTAAACGCACCCATACAAAAACCACAAAACAAACCCACTTCATCGCAGCAAT
CTCTTCAAAACTTTCCTTACACAGAGTCCAAACTAGGCTTTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAATTAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTCAGAAGA
TCAAGAAAACAATCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACTCCTAACGCTAATATTAATGAAC
ACAATGAAAGCAATGAAAATAGGGATAATGGGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCATGCGGG
AAGTGGGTCTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTCATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATCAAACAG
AGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAGCCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.693	100	0.931