Detailed information NTG0919395

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: VA210_RS06365
• Genome accession: NZ_CP141773
• Coordinates: 1306405..1307844 (+)
• Length: 479 a.a.
• NCBI ID: WP_324713557.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain P08205
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1301405..1312844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VA210_RS06340	thyX	1301406..1302032 (-)	627	WP_000451934.1	FAD-dependent thymidylate synthase	-
VA210_RS06345	glmS	1302054..1303847 (-)	1794	WP_324713554.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
VA210_RS06350	-	1303848..1304087 (-)	240	WP_000461845.1	DUF2443 domain-containing protein	-
VA210_RS06355	-	1304123..1304665 (-)	543	WP_324713555.1	purine-nucleoside phosphorylase	-
VA210_RS06360	dnaA	1304817..1306184 (+)	1368	WP_324713556.1	chromosomal replication initiator protein DnaA	-
VA210_RS06365	comH	1306405..1307844 (+)	1440	WP_324713557.1	competence protein	Machinery gene
VA210_RS06375	-	1308022..1308774 (+)	753	WP_000767501.1	exodeoxyribonuclease III	-
VA210_RS06380	-	1308771..1309406 (-)	636	WP_180577022.1	outer membrane protein	-
VA210_RS06385	-	1309410..1309763 (-)	354	WP_096397332.1	hypothetical protein	-
VA210_RS06390	recG	1309845..1311710 (+)	1866	WP_324713558.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54884.79 Da
• Isoelectric Point: 7.0005

>NTDB_id=919395 VA210_RS06365 WP_324713557.1 1306405..1307844(+) (comH) [Helicobacter pylori strain P08205]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPIIPRNTQIVFSSKELKEPHPHQMPSLNAPIQKPQNKPTSSQQSLQNFSYTESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLKHSSEDQENNLFVAPPTEKTLPNNTPNTDISENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=919395 VA210_RS06365 WP_324713557.1 1306405..1307844(+) (comH) [Helicobacter pylori strain P08205]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCTCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGGCAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTATTATTCCCAGAAATACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTCTTCAAAACTTTTCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAATAACCTCTTTGTAGCACCACCCACTGAAAAAACACTCCCTAACAACACCCCTAACACTGATATTA
GTGAAAACAATGAGAGTAATGAGAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCCACTTATGAACGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTTTATGAAACTAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.111	100	0.931