Detailed information NTG0919294

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AB2M35_RS01665
• Genome accession: NZ_CP161902
• Coordinates: 322471..323592 (+)
• Length: 373 a.a.
• NCBI ID: WP_069837225.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DYJ22
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 317471..328592

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2M35_RS01640 (AB2M35_01640)	ycdA	317485..318504 (-)	1020	WP_069837224.1	DUF4352 domain-containing protein	-
AB2M35_RS01645 (AB2M35_01645)	-	318563..318694 (-)	132	WP_003246334.1	hypothetical protein	-
AB2M35_RS01650 (AB2M35_01650)	ycdB	318868..320289 (+)	1422	WP_041335264.1	YcdB/YcdC domain-containing protein	-
AB2M35_RS01655 (AB2M35_01655)	ycdC	320476..321837 (+)	1362	WP_026113616.1	YcdB/YcdC domain-containing protein	-
AB2M35_RS01660 (AB2M35_01660)	cwlK	321845..322348 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
AB2M35_RS01665 (AB2M35_01665)	rapF	322471..323592 (+)	1122	WP_069837225.1	response regulator aspartate phosphatase RapJ	Regulator
AB2M35_RS01670 (AB2M35_01670)	ycdF	323699..324475 (+)	777	WP_014478742.1	SDR family oxidoreductase	-
AB2M35_RS01675 (AB2M35_01675)	ycdG	324499..326184 (+)	1686	WP_031600124.1	alpha-glucosidase	-
AB2M35_RS01680 (AB2M35_01680)	znuA	326371..327330 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
AB2M35_RS01685 (AB2M35_01685)	znuC	327385..328080 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44354.20 Da
• Isoelectric Point: 4.8344

>NTDB_id=919294 AB2M35_RS01665 WP_069837225.1 322471..323592(+) (rapF) [Bacillus subtilis strain DYJ22]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLLNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=919294 AB2M35_RS01665 WP_069837225.1 322471..323592(+) (rapF) [Bacillus subtilis strain DYJ22]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAGCTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGATCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAACTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGCTGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405