Detailed information NTG0919110

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABXJ20_RS21215
• Genome accession: NZ_CP161803
• Coordinates: 4359665..4360690 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Z135-5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4354665..4365690

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXJ20_RS21185 (ABXJ20_21185)	zapB	4354749..4354994 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABXJ20_RS21190 (ABXJ20_21190)	rraA	4355079..4355564 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABXJ20_RS21195 (ABXJ20_21195)	menA	4355657..4356583 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABXJ20_RS21200 (ABXJ20_21200)	hslU	4356650..4357981 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABXJ20_RS21205 (ABXJ20_21205)	hslV	4357991..4358521 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABXJ20_RS21210 (ABXJ20_21210)	ftsN	4358614..4359573 (-)	960	WP_000068834.1	cell division protein FtsN	-
ABXJ20_RS21215 (ABXJ20_21215)	cytR	4359665..4360690 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABXJ20_RS21220 (ABXJ20_21220)	priA	4360846..4363044 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABXJ20_RS21225 (ABXJ20_21225)	rpmE	4363247..4363459 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABXJ20_RS21230 (ABXJ20_21230)	yiiX	4363520..4364128 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABXJ20_RS21235 (ABXJ20_21235)	metJ	4364188..4364505 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=919110 ABXJ20_RS21215 WP_000644908.1 4359665..4360690(-) (cytR) [Escherichia coli strain Z135-5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=919110 ABXJ20_RS21215 WP_000644908.1 4359665..4360690(-) (cytR) [Escherichia coli strain Z135-5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625