Detailed information NTG0091870

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QQJ99_RS22225
• Genome accession: NZ_AP027953
• Coordinates: 4553023..4554048 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain VE-F5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4548023..4559048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQJ99_RS22205 (VEF5_42690)	metJ	4549084..4549401 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QQJ99_RS22210 (VEF5_42700)	yiiX	4549585..4550193 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QQJ99_RS22215 (VEF5_42710)	rpmE	4550254..4550466 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QQJ99_RS22220 (VEF5_42720)	priA	4550669..4552867 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
QQJ99_RS22225 (VEF5_42730)	cytR	4553023..4554048 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QQJ99_RS22230 (VEF5_42740)	ftsN	4554140..4555099 (+)	960	WP_000068828.1	cell division protein FtsN	-
QQJ99_RS22235 (VEF5_42750)	hslV	4555192..4555722 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QQJ99_RS22240 (VEF5_42760)	hslU	4555732..4557063 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QQJ99_RS22245 (VEF5_42770)	menA	4557130..4558056 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QQJ99_RS22250 (VEF5_42780)	rraA	4558149..4558634 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QQJ99_RS22255 (VEF5_42790)	zapB	4558719..4558964 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91870 QQJ99_RS22225 WP_000644904.1 4553023..4554048(+) (cytR) [Escherichia coli strain VE-F5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91870 QQJ99_RS22225 WP_000644904.1 4553023..4554048(+) (cytR) [Escherichia coli strain VE-F5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628