Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   ABZO29_RS20060 Genome accession   NZ_CP160403
Coordinates   4393429..4394553 (+) Length   374 a.a.
NCBI ID   WP_367321566.1    Uniprot ID   -
Organism   Streptomyces sp. HUAS ZL42     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4388429..4399553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZO29_RS20045 (ABZO29_20045) - 4389162..4390046 (+) 885 WP_367321563.1 hypothetical protein -
  ABZO29_RS20050 (ABZO29_20050) - 4390064..4391758 (-) 1695 WP_367321564.1 hypothetical protein -
  ABZO29_RS20055 (ABZO29_20055) radA/sms 4391938..4393347 (+) 1410 WP_367321565.1 DNA repair protein RadA Machinery gene
  ABZO29_RS20060 (ABZO29_20060) disA 4393429..4394553 (+) 1125 WP_367321566.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ABZO29_RS20065 (ABZO29_20065) - 4394697..4395494 (-) 798 WP_367321567.1 hypothetical protein -
  ABZO29_RS20070 (ABZO29_20070) - 4395706..4396659 (+) 954 WP_367321568.1 A/G-specific adenine glycosylase -
  ABZO29_RS20075 (ABZO29_20075) - 4396939..4397481 (+) 543 WP_367321569.1 SigE family RNA polymerase sigma factor -
  ABZO29_RS20080 (ABZO29_20080) - 4397466..4398125 (+) 660 WP_367321570.1 hypothetical protein -
  ABZO29_RS20085 (ABZO29_20085) cseB 4398287..4398991 (+) 705 WP_367321571.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40070.74 Da        Isoelectric Point: 4.9201

>NTDB_id=918351 ABZO29_RS20060 WP_367321566.1 4393429..4394553(+) (disA) [Streptomyces sp. HUAS ZL42]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=918351 ABZO29_RS20060 WP_367321566.1 4393429..4394553(+) (disA) [Streptomyces sp. HUAS ZL42]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGCACGGCACTGCGTGACGGCCTCGAGCGGGTTCTGCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTGGAGACCATGTGCACGGGCGGTTTCGTCCTGGATGTCGAGTTCACGGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCGTCGGACCTGTCGAAGATCCTTCGGGCGGGCGTGCAGTTCGTGCC
CGACGCGACGATCCCGACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCTG
TCGTCTCGGTCTCCCAGTCCATGCGCCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGTGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTCGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGACGTCTGCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAACCCGAGCGCGAACTGGTGGTGCGGGACTACGTCCCCGAGCCGACGGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTGTACGAGCTCGACGCCCTCACCCACGCCGAGCTCCTCGAACTGTCCACGGTGGCCCGCGCCCTGGGCTACACCG
GCTCCCCCGAGGCCCTGGACTCGGCGGTCTCCCCGCGCGGCTTCCGCCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCC
ATCATCGACCGTCTCGTCGAGCACTTCGGCGGACTGCAGAAGCTCCTCGCGGCGAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCCGCGCCCGAAGCGTCCGGGAGGGCCTGTCAAGGCTGGCGGAGTCGTCGATCCTGGAACGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.11

92.513

0.436