Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AB1F75_RS15435 Genome accession   NZ_CP160396
Coordinates   2997243..2997986 (-) Length   247 a.a.
NCBI ID   WP_015252439.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2992243..3002986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS15415 (AB1F75_15415) - 2992622..2994013 (+) 1392 WP_080019530.1 hypothetical protein -
  AB1F75_RS15420 (AB1F75_15420) sndC 2994085..2995275 (+) 1191 WP_044052577.1 N-acetyl amino acid acetylase SndC -
  AB1F75_RS15425 (AB1F75_15425) ecsC 2995293..2996003 (-) 711 WP_015252437.1 EcsC family protein -
  AB1F75_RS15430 (AB1F75_15430) ecsB 2996023..2997250 (-) 1228 Protein_3047 ABC transporter permease EcsB -
  AB1F75_RS15435 (AB1F75_15435) pptA 2997243..2997986 (-) 744 WP_015252439.1 ABC transporter ATP-binding protein EcsA Regulator
  AB1F75_RS15440 (AB1F75_15440) hinT 2998472..2998909 (+) 438 WP_003233231.1 HIT family protein -
  AB1F75_RS15445 (AB1F75_15445) serC 2999056..3000135 (+) 1080 WP_015252440.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  AB1F75_RS15450 (AB1F75_15450) trpP 3000260..3000778 (+) 519 WP_003233236.1 tryptophan transporter TrpP -
  AB1F75_RS15455 (AB1F75_15455) - 3000852..3001043 (-) 192 WP_003233238.1 hypothetical protein -
  AB1F75_RS15460 (AB1F75_15460) yhaH 3001173..3001529 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  AB1F75_RS15465 (AB1F75_15465) scoC 3001708..3002319 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  AB1F75_RS15470 (AB1F75_15470) yhaI 3002316..3002657 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27738.20 Da        Isoelectric Point: 5.9114

>NTDB_id=918205 AB1F75_RS15435 WP_015252439.1 2997243..2997986(-) (pptA) [Bacillus subtilis subsp. subtilis strain BSP1]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFSEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=918205 AB1F75_RS15435 WP_015252439.1 2997243..2997986(-) (pptA) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGTCTCTGCTATCGGTAAAAGACTTAACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACATATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTTCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATATGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAGAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547