Detailed information NTG0918140

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB1F75_RS07990
• Genome accession: NZ_CP160396
• Coordinates: 1540080..1541207 (+)
• Length: 375 a.a.
• NCBI ID: WP_015251664.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain BSP1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1535080..1546207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F75_RS07960 (AB1F75_07960)	-	1535470..1535934 (-)	465	WP_015251659.1	SMI1/KNR4 family protein	-
AB1F75_RS07965 (AB1F75_07965)	-	1535948..1537714 (-)	1767	WP_015251660.1	T7SS effector LXG polymorphic toxin	-
AB1F75_RS07970 (AB1F75_07970)	-	1538084..1538242 (-)	159	WP_015251661.1	hypothetical protein	-
AB1F75_RS07975 (AB1F75_07975)	-	1538353..1538487 (-)	135	WP_015251662.1	hypothetical protein	-
AB1F75_RS07980 (AB1F75_07980)	-	1538626..1539300 (-)	675	WP_015251663.1	TraX family protein	-
AB1F75_RS07985 (AB1F75_07985)	-	1539605..1539685 (-)	81	Protein_1563	RNA polymerase subunit sigma	-
AB1F75_RS07990 (AB1F75_07990)	rapC	1540080..1541207 (+)	1128	WP_015251664.1	Rap family tetratricopeptide repeat protein	Regulator
AB1F75_RS07995 (AB1F75_07995)	-	1541550..1541639 (+)	90	Protein_1565	hypothetical protein	-
AB1F75_RS08000 (AB1F75_08000)	-	1542141..1543239 (+)	1099	Protein_1566	glycosyl hydrolase	-
AB1F75_RS08005 (AB1F75_08005)	-	1543883..1544061 (+)	179	Protein_1567	hypothetical protein	-
AB1F75_RS08010 (AB1F75_08010)	spoIVCA	1544019..1545479 (+)	1461	WP_235701260.1	site-specific DNA recombinase SpoIVCA	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44234.49 Da
• Isoelectric Point: 5.6727

>NTDB_id=918140 AB1F75_RS07990 WP_015251664.1 1540080..1541207(+) (rapC) [Bacillus subtilis subsp. subtilis strain BSP1]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIDE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYIDFKRYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
FMKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQHGVNQTI
EYLEKNKNYSYVEDIACETADAYANLKEFETSYVYHQKMVETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=918140 AB1F75_RS07990 WP_015251664.1 1540080..1541207(+) (rapC) [Bacillus subtilis subsp. subtilis strain BSP1]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTTCC
GGATGCAGAGATTTTAAAGGCAGAGGTGGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAACTCATGTTAGATTATTTGGAACCAGTAACAACACGTATAAGACCAACTATTGACGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGTCTTTTGTCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGGAAAGTTCAATGTATGTTTGTTATTTCAGG
GAATTATATAGATTTTAAACGTTATGAAAAAAGTCAGCCGCATCTTGAAAAAGCATTAGAGTTATCGAGGGAATTGAATA
ACAAGAGGTTGATTAGTTCTGCGTTATATAATTTAGGCACAAATTTTGCTGACAGTGGCGATTACGAGCAAGCGGAAGTA
TTCATGAAGCAAGCTGTGGAGATAACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAAGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGTTATTTAAAAGCTCTTTACGTCGATGCGGTGGATCAACATGGAGTTAATCAAACCATA
GAATACTTAGAGAAGAATAAGAACTATTCTTATGTTGAAGACATTGCCTGTGAGACCGCAGATGCTTATGCAAACTTAAA
AGAATTTGAAACATCTTATGTTTACCATCAGAAAATGGTTGAAACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (193-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	43.883	100	0.44
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397