Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB1F75_RS00380 Genome accession   NZ_CP160396
Coordinates   62987..63781 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 57987..68781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS00360 (AB1F75_00360) walR 58229..58936 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  AB1F75_RS00365 (AB1F75_00365) walK 58944..60779 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  AB1F75_RS00370 (AB1F75_00370) walH 60769..62136 (+) 1368 WP_015250810.1 WalRK two-component regulatory system regulator WalH -
  AB1F75_RS00375 (AB1F75_00375) walI 62123..62965 (+) 843 WP_015250811.1 WalRK two-component regulatory system regulator WalI -
  AB1F75_RS00380 (AB1F75_00380) vicX 62987..63781 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  AB1F75_RS00385 (AB1F75_00385) htrA 63863..65065 (+) 1203 WP_015250812.1 serine protease HtrC Regulator
  AB1F75_RS00390 (AB1F75_00390) - 65086..65215 (+) 130 Protein_73 hypothetical protein -
  AB1F75_RS00395 (AB1F75_00395) - 65212..65712 (-) 501 WP_015250813.1 PepSY domain-containing protein -
  AB1F75_RS00400 (AB1F75_00400) - 65873..66772 (-) 900 WP_015250814.1 PepSY domain-containing protein -
  AB1F75_RS00405 (AB1F75_00405) - 66984..67668 (+) 685 Protein_76 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=918096 AB1F75_RS00380 WP_003226939.1 62987..63781(+) (vicX) [Bacillus subtilis subsp. subtilis strain BSP1]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=918096 AB1F75_RS00380 WP_003226939.1 62987..63781(+) (vicX) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCAAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53