Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AB1F71_RS04260 Genome accession   NZ_CP160386
Coordinates   859710..861482 (+) Length   590 a.a.
NCBI ID   WP_002262898.1    Uniprot ID   Q8DUL5
Organism   Streptococcus mutans strain UA159 ykuR deletion     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 854710..866482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F71_RS04250 (AB1F71_04250) - 855638..857506 (+) 1869 WP_002262895.1 ABC-F family ATP-binding cassette domain-containing protein -
  AB1F71_RS04255 (AB1F71_04255) rcrP 857963..859699 (+) 1737 WP_002262897.1 ABC transporter ATP-binding protein Regulator
  AB1F71_RS04260 (AB1F71_04260) rcrQ 859710..861482 (+) 1773 WP_002262898.1 ABC transporter ATP-binding protein Regulator
  AB1F71_RS04265 (AB1F71_04265) - 861598..862518 (+) 921 WP_002262899.1 AEC family transporter -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 66866.58 Da        Isoelectric Point: 6.8935

>NTDB_id=918014 AB1F71_RS04260 WP_002262898.1 859710..861482(+) (rcrQ) [Streptococcus mutans strain UA159 ykuR deletion]
MKKKTVFLRLWYYLKTYKGSLFLAIFLKILSSVMNVLEPFILGLVMTELTANLIDMARGVQGAHLNIRYITMILFLYFLR
GLLYSIGSYGSNYFMTNAVQKSIYDLRHDLSEKINKIPVSYFDKHQFGDMLGRFTNDVETVSNALQQSFLQIINAFLTII
LVVVMVLYLNLTLAAIILVCIPLTYFSSHFILRKSQPYFKKQANALGDMNSFVQENLTGFNVIKLYGREEISAETFRTIT
ENLRDVGFKASFISGIMMPVLNAISDLAYLIVALVGGLQVLAGRLTIGNMQAFVQYIWQINQPIQTITQLSSVLQSAKSS
LERIFEVLDETDEVNQVKEKLEHDLTGQVTFHNVAFQYTEDKPLIRHFDLDVKPGQMIAVVGPTGAGKTTLINLLMRFYD
VTQGAITVDNHDIRNLSRQEYRKQFGMVLQDAWLYEGTIKDNLRFGNLQASDEEIVEAAKAANVDHFIRTLPDGYNMEVN
QESNNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMSKLMEGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHQSLLADKGFYYDLYMSQFSAKTN

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=918014 AB1F71_RS04260 WP_002262898.1 859710..861482(+) (rcrQ) [Streptococcus mutans strain UA159 ykuR deletion]
ATGAAAAAGAAAACTGTCTTTTTACGCTTATGGTATTATTTGAAAACCTATAAAGGTTCACTCTTTTTGGCTATTTTTTT
AAAAATACTTAGCAGTGTCATGAATGTCCTTGAGCCTTTTATTTTAGGACTGGTAATGACAGAATTAACGGCTAACTTAA
TTGATATGGCTCGCGGAGTTCAAGGCGCTCATCTCAATATCAGATATATTACCATGATTTTATTTCTTTATTTTTTACGT
GGCTTGCTGTATAGTATTGGCTCTTACGGTTCTAATTACTTTATGACTAATGCAGTGCAAAAAAGCATTTACGATTTGCG
TCATGATTTGAGTGAAAAGATTAATAAGATTCCCGTTTCTTATTTTGATAAACATCAATTTGGCGATATGTTAGGACGTT
TCACTAATGACGTTGAAACAGTCTCCAACGCTTTACAGCAGAGCTTTCTGCAGATTATTAATGCTTTTTTGACAATTATC
CTTGTTGTGGTTATGGTGCTTTACCTCAATTTGACTCTGGCGGCGATTATTCTTGTTTGTATTCCGCTGACTTATTTCAG
TTCTCATTTTATTTTAAGGAAATCACAGCCTTATTTTAAAAAACAGGCTAATGCTTTAGGGGATATGAACAGTTTCGTTC
AGGAAAACTTAACGGGCTTTAATGTCATAAAACTCTATGGACGTGAAGAAATATCTGCTGAAACCTTTCGAACTATCACA
GAAAATTTACGAGATGTCGGCTTTAAAGCCAGTTTTATTTCTGGAATAATGATGCCAGTTCTTAATGCTATCTCAGACTT
AGCTTATTTGATTGTTGCATTAGTTGGCGGCCTGCAGGTCTTAGCAGGGAGACTGACTATTGGTAATATGCAGGCCTTTG
TTCAATACATTTGGCAAATCAATCAGCCTATTCAGACCATCACACAATTATCAAGTGTTCTTCAAAGTGCTAAATCTTCT
CTAGAACGTATTTTTGAGGTTTTGGATGAAACAGATGAAGTCAATCAAGTCAAGGAAAAGCTGGAACATGATTTGACAGG
GCAAGTGACCTTTCATAATGTCGCCTTTCAATATACTGAAGATAAGCCTTTAATTCGACATTTTGATTTAGATGTTAAAC
CGGGTCAGATGATTGCTGTTGTTGGTCCGACCGGGGCGGGTAAGACAACTCTTATCAATCTTTTGATGCGTTTTTATGAT
GTTACCCAAGGAGCGATTACAGTAGATAATCATGATATCCGTAACCTTTCCCGTCAGGAATATCGGAAACAATTTGGGAT
GGTTCTTCAAGATGCTTGGTTATATGAAGGGACGATCAAAGACAATTTGCGCTTTGGAAATTTGCAGGCAAGTGATGAGG
AAATTGTCGAAGCAGCCAAGGCAGCTAATGTCGATCATTTTATCCGAACCCTTCCAGACGGTTATAATATGGAAGTCAAT
CAAGAATCTAATAATATTTCTTTGGGGCAAAAGCAATTGTTAACCATAGCACGAGCGCTGCTGGCTGATCCCAAAATTCT
GATTCTGGATGAAGCGACTTCTTCAGTTGATACTCGTTTGGAACTTCTCATTCAAAAAGCTATGAGTAAGCTTATGGAAG
GCCGCACTAGCTTTGTTATTGCTCATCGTCTTTCAACTATCCAAGAAGCCGATAAGATCCTTGTCCTTAAGGATGGTCAA
ATTATTGAACAGGGGAACCATCAAAGTCTCTTAGCTGACAAGGGCTTCTATTATGATTTGTATATGAGTCAGTTTAGCGC
TAAAACCAATTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-303)

ABC transporter (ABC_tran)

(367-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUL5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

45.025

100

0.453