Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U9S62_RS32775 Genome accession   NZ_CP141683
Coordinates   6948355..6948750 (-) Length   131 a.a.
NCBI ID   WP_010792705.1    Uniprot ID   A0A1V0M630
Organism   Pseudomonas aeruginosa strain ZM21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6943355..6953750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U9S62_RS32735 (U9S62_32735) - 6943382..6944068 (-) 687 WP_010792697.1 hypothetical protein -
  U9S62_RS32740 (U9S62_32740) - 6944080..6944289 (-) 210 WP_010792698.1 hypothetical protein -
  U9S62_RS33730 - 6944342..6944752 (-) 411 WP_010792699.1 helix-turn-helix transcriptional regulator -
  U9S62_RS32745 (U9S62_32745) - 6944749..6945204 (-) 456 WP_019437999.1 hypothetical protein -
  U9S62_RS32750 (U9S62_32750) - 6945201..6945917 (-) 717 WP_010792700.1 hypothetical protein -
  U9S62_RS32755 (U9S62_32755) - 6946430..6946831 (-) 402 WP_010792702.1 hypothetical protein -
  U9S62_RS32760 (U9S62_32760) - 6946923..6947303 (-) 381 WP_019438002.1 WGR domain-containing protein -
  U9S62_RS32765 (U9S62_32765) - 6947434..6947676 (-) 243 WP_010792703.1 hypothetical protein -
  U9S62_RS32770 (U9S62_32770) - 6947824..6948279 (-) 456 WP_010792704.1 hypothetical protein -
  U9S62_RS32775 (U9S62_32775) pilG 6948355..6948750 (-) 396 WP_010792705.1 response regulator Regulator
  U9S62_RS32780 (U9S62_32780) - 6948852..6949073 (-) 222 WP_021018443.1 hypothetical protein -
  U9S62_RS32785 (U9S62_32785) - 6949070..6949396 (-) 327 WP_010792706.1 hypothetical protein -
  U9S62_RS32790 (U9S62_32790) - 6949547..6949879 (+) 333 WP_019438004.1 MarR family transcriptional regulator -
  U9S62_RS32795 (U9S62_32795) - 6949924..6950496 (-) 573 WP_019438005.1 hypothetical protein -
  U9S62_RS32800 (U9S62_32800) - 6950531..6951280 (-) 750 WP_176600778.1 tetratricopeptide repeat protein -
  U9S62_RS32805 (U9S62_32805) - 6951779..6952306 (-) 528 WP_019438006.1 DUF262 domain-containing protein -
  U9S62_RS32810 (U9S62_32810) - 6952408..6952644 (-) 237 WP_019438007.1 YheU family protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14623.12 Da        Isoelectric Point: 7.0605

>NTDB_id=917974 U9S62_RS32775 WP_010792705.1 6948355..6948750(-) (pilG) [Pseudomonas aeruginosa strain ZM21]
MSNLSPLRVMLVDDSRTIRKTGEVMLAKAGCEVLCVVDGFECLGRALDFKPDLIFIDVLMPRLNGYQTCQLIRSRDSFKS
VPVVMLSSKDGLFDIALGKKHGATDYITKPFTQDDLLSAVRKHCPQFEPEV

Nucleotide


Download         Length: 396 bp        

>NTDB_id=917974 U9S62_RS32775 WP_010792705.1 6948355..6948750(-) (pilG) [Pseudomonas aeruginosa strain ZM21]
ATGAGTAATCTATCCCCCTTGCGAGTCATGCTTGTCGATGACTCCCGAACTATCCGAAAAACGGGCGAAGTCATGCTCGC
TAAGGCAGGATGCGAGGTGCTTTGCGTTGTCGACGGGTTCGAATGTCTCGGCCGAGCTCTGGACTTTAAACCAGACCTCA
TTTTCATCGACGTCCTCATGCCGCGGCTCAACGGTTACCAGACCTGCCAACTGATTCGTAGCCGGGACAGTTTCAAGTCA
GTTCCTGTGGTGATGCTTTCGTCGAAGGATGGCCTGTTTGACATCGCCTTGGGCAAAAAACACGGCGCAACAGACTACAT
CACCAAACCGTTTACCCAGGACGATCTACTCTCCGCGGTAAGGAAACACTGCCCGCAATTTGAACCTGAGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V0M630

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

53.846

89.313

0.481