Detailed information NTG0091789

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QQK65_RS21485
• Genome accession: NZ_AP027946
• Coordinates: 4458653..4459678 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain VE-F10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4453653..4464678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQK65_RS21465 (VEF10_41120)	metJ	4454714..4455031 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QQK65_RS21470 (VEF10_41130)	yiiX	4455215..4455823 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QQK65_RS21475 (VEF10_41140)	rpmE	4455884..4456096 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QQK65_RS21480 (VEF10_41150)	priA	4456299..4458497 (+)	2199	WP_064674126.1	primosomal protein N'	Machinery gene
QQK65_RS21485 (VEF10_41160)	cytR	4458653..4459678 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QQK65_RS21490 (VEF10_41170)	ftsN	4459770..4460729 (+)	960	WP_000068828.1	cell division protein FtsN	-
QQK65_RS21495 (VEF10_41180)	hslV	4460822..4461352 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QQK65_RS21500 (VEF10_41190)	hslU	4461362..4462693 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QQK65_RS21505 (VEF10_41200)	menA	4462760..4463686 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QQK65_RS21510 (VEF10_41210)	rraA	4463779..4464264 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QQK65_RS21515 (VEF10_41220)	zapB	4464349..4464594 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91789 QQK65_RS21485 WP_000644904.1 4458653..4459678(+) (cytR) [Escherichia coli strain VE-F10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91789 QQK65_RS21485 WP_000644904.1 4458653..4459678(+) (cytR) [Escherichia coli strain VE-F10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628