Detailed information NTG0917779

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: QRP18_RS01335
• Genome accession: NZ_CP160382
• Coordinates: 282960..285164 (-)
• Length: 734 a.a.
• NCBI ID: WP_029805229.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain ST110-8
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 277960..290164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRP18_RS01310 (QRP18_01310)	-	278178..278402 (+)	225	WP_020904301.1	hypothetical protein	-
QRP18_RS01315 (QRP18_01315)	hslU	278828..280159 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
QRP18_RS01320 (QRP18_01320)	hslV	280183..280734 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
QRP18_RS01325 (QRP18_01325)	ftsN	280898..281443 (-)	546	WP_005489623.1	cell division protein FtsN	-
QRP18_RS01330 (QRP18_01330)	cytR	281620..282627 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
QRP18_RS01335 (QRP18_01335)	priA	282960..285164 (-)	2205	WP_029805229.1	primosomal protein N'	Machinery gene
QRP18_RS01340 (QRP18_01340)	rpmE	285459..285680 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
QRP18_RS01345 (QRP18_01345)	rpsJ	286138..286449 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
QRP18_RS01350 (QRP18_01350)	rplC	286464..287093 (+)	630	WP_005456132.1	50S ribosomal protein L3	-
QRP18_RS01355 (QRP18_01355)	rplD	287111..287713 (+)	603	WP_005379556.1	50S ribosomal protein L4	-
QRP18_RS01360 (QRP18_01360)	rplW	287710..288012 (+)	303	WP_004398471.1	50S ribosomal protein L23	-
QRP18_RS01365 (QRP18_01365)	rplB	288028..288852 (+)	825	WP_005489461.1	50S ribosomal protein L2	-
QRP18_RS01370 (QRP18_01370)	rpsS	288874..289152 (+)	279	WP_004394525.1	30S ribosomal protein S19	-
QRP18_RS01375 (QRP18_01375)	rplV	289163..289495 (+)	333	WP_005383164.1	50S ribosomal protein L22	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82299.93 Da
• Isoelectric Point: 8.7811

>NTDB_id=917779 QRP18_RS01335 WP_029805229.1 282960..285164(-) (priA) [Vibrio parahaemolyticus strain ST110-8]
MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKDQLKPIKAVLDSQPVWPEKLYS
LLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWRITESGKDKLMQGLDRRAVKQQKVLQMLVNGALPHQEFVDQ
EIASTVLKSLEEKGWIERIEKKPVITKWGQHVECDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGIIIGTRSALLAPFADLGIIIV
DEEHDTSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALSGKYHHLTLTQRAGSAVPTTNKVLDVKGQYL
ESGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEQQLAQLFPEYKAIRIDRDSTRRKGSLEDALDSIRKGEYQILIGTQMLAKGHHFPNVTLVALLDV
DGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLF
KAEANQSEIVEDFLRQVRFTLESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS

Nucleotide

• Length: 2205 bp

>NTDB_id=917779 QRP18_RS01335 WP_029805229.1 282960..285164(-) (priA) [Vibrio parahaemolyticus strain ST110-8]
ATGCGTCCATCCATTGCTAGAGTGGCACTGCCCGTACCTCTCGACAAACAATTTGACTATGCCATCCCAGGACACCTGTT
TCCTATCATTGGTGGGCGCGTATCCGTACCTTTTGGACGTCAAACGTTAGTTGGCATCGTCACCGCGATGGTTAATCACT
CGGATTTCCCCAAAGATCAACTCAAGCCAATCAAAGCAGTTCTTGATTCTCAGCCGGTATGGCCTGAAAAGCTTTATTCG
TTGCTGACTTGGTGCAGCCAGTTCTACCAATACCCACTTGGAGATACGCTACACAATGCGATGCCAGCAGCTCTGCGTAA
AGGAAAGCCTGCAGATTTTGCGACGCTACAAGAGTGGCGAATTACCGAATCCGGTAAAGACAAGCTGATGCAAGGGCTTG
ATCGTCGAGCGGTCAAACAACAGAAGGTCTTGCAAATGTTGGTTAACGGCGCTTTGCCTCACCAGGAATTTGTCGACCAA
GAGATAGCCTCAACTGTACTAAAGTCTTTAGAAGAGAAAGGCTGGATTGAACGTATCGAGAAGAAGCCTGTAATCACCAA
GTGGGGGCAGCACGTTGAATGCGACGTCGAGAAGCCAAAGCTCAACCACGAACAAGCGCTAGCTATTGCGAGTGTAAATA
GCCAAACAGGTTTTGCCTGCTATTTATTAGAAGGCGTCACGGGCTCAGGTAAGACAGAAGTGTACCTTAACCTGATCAAA
CCGGTCTTAGAGAAAGGTAAACAAGCCTTGGTTTTAGTACCAGAGATTGGCTTAACACCACAAACCATCAACCGCTTTAA
ACGCCGTTTTAATGTGCCAGTTGACGTTATCCACTCCGGATTAAACGAGACGGAGCGTCTGAATGCGTGGCTTTCTGCAC
GCGACAAAGCGGCCGGAATCATTATCGGCACTCGCTCTGCCCTACTCGCGCCTTTTGCTGATCTCGGGATTATCATTGTG
GACGAGGAACATGACACCTCTTACAAACAGCAAGATAGCTTGCGTTATCATGCACGCGATGTTGCTGTAATGCGCGCTCA
TAAAGAACAAGTTCCGATTGTTCTGGGCTCAGCCACACCTGCACTGGAAACATTGCACAATGCCTTGTCAGGCAAGTATC
ACCATTTAACCCTGACCCAACGCGCAGGCTCTGCGGTTCCTACTACTAATAAAGTGCTCGACGTCAAAGGTCAGTATTTA
GAAAGTGGTTTATCTGCCCCATTGATTGCGGAAATGCGTAAACACCTTAAAGCAGGCAATCAGGTGATGCTGTTTCTTAA
CCGTCGTGGTTTCTCCCCTGCTCTCATGTGTCATGAATGTGGTTGGATTGCCGAATGCAAACGTTGTGATGCTTATTACA
CCTTCCACCAATACAGCAATGAGATTCGCTGCCACCATTGTGGCTCGCAGCAACCAGTGATTCATCAGTGTCAGGGCTGT
GGTTCAACTCAACTGGTTACCGTTGGTGTCGGTACCGAACAGTTAGAACAACAATTGGCACAATTGTTTCCCGAATACAA
AGCCATCCGAATAGACAGGGATAGCACGCGCCGCAAAGGCAGTTTAGAAGATGCGCTGGACTCCATCCGCAAGGGTGAAT
ATCAAATTTTGATTGGCACTCAAATGTTAGCTAAGGGACACCATTTTCCCAATGTAACGCTCGTTGCCTTGCTAGATGTT
GATGGCTCTCTATATAGTAGCGACTTTCGCGCCTCCGAAAGATTAGCGCAGCTATTCATTCAAGTCGCAGGGCGAGCCGG
ACGAGCAAGTAAGCCGGGGGAAGTGGTTTTACAGACTCACCATCCTGAGCACAGTTTGTTGCAAGCCTTATTGGAAAAAG
ACTACCGACACTTCGCTATGACGGCATTAGAGGAACGTAAACTGGCGCAGTTGCCACCGTACAGTTTCCTGACTCTATTT
AAAGCCGAAGCGAATCAGAGCGAGATCGTAGAAGATTTTCTGCGCCAAGTTCGCTTTACCTTAGAATCGCACCCTTTGTT
TGACGACACCTGCATGGTGCTTGGTCCAACACCATCGCCTCTCGCCAAACGCGCAGGCAAATACCGTTGGCAGCTGTTAC
TCCAAACCCAGCACCGTTCATTAATGCAAAAGTTATTAACCAGTGCCAAACCTGCTATTGAGTTGTTGCCTAATGCCAAA
AAAGTTCGCTGGAATTTAGACATAGAACCACAAGATCTCAGCTAG

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (633-730)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (446-472)

• Helicase conserved C-terminal domain (Helicase_C) (500-589)

• DEAD/DEAH box helicase (DEAD) (220-365)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	43.419	100	0.436
priA	Bacillus subtilis subsp. subtilis str. 168	34.131	100	0.369