Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U9R80_RS01835 Genome accession   NZ_CP141608
Coordinates   415104..415514 (+) Length   136 a.a.
NCBI ID   WP_301838396.1    Uniprot ID   -
Organism   Pseudomonas sp. JQ170C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 410104..420514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U9R80_RS01805 (U9R80_01805) - 410171..411175 (-) 1005 WP_038997542.1 aspartate carbamoyltransferase catalytic subunit -
  U9R80_RS01810 (U9R80_01810) pyrR 411188..411706 (-) 519 WP_301838400.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  U9R80_RS01815 (U9R80_01815) ruvX 411767..412204 (-) 438 WP_167332140.1 Holliday junction resolvase RuvX -
  U9R80_RS01820 (U9R80_01820) - 412201..412770 (-) 570 WP_301838399.1 YqgE/AlgH family protein -
  U9R80_RS01825 (U9R80_01825) - 412834..413739 (-) 906 WP_301838398.1 energy transducer TonB -
  U9R80_RS01830 (U9R80_01830) gshB 413849..414802 (-) 954 WP_301838397.1 glutathione synthase -
  U9R80_RS01835 (U9R80_01835) pilG 415104..415514 (+) 411 WP_301838396.1 twitching motility response regulator PilG Regulator
  U9R80_RS01840 (U9R80_01840) pilH 415560..415925 (+) 366 WP_274117306.1 twitching motility response regulator PilH -
  U9R80_RS01845 (U9R80_01845) - 415922..416476 (+) 555 WP_301838395.1 chemotaxis protein CheW -
  U9R80_RS01850 (U9R80_01850) - 416492..418537 (+) 2046 WP_301838394.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14894.19 Da        Isoelectric Point: 5.1866

>NTDB_id=917675 U9R80_RS01835 WP_301838396.1 415104..415514(+) (pilG) [Pseudomonas sp. JQ170C]
MEQPGAALKVMVIDDSKTIRRTAQMLLSEAGCEVITATDGFDALAKIVDQHPQIIFVDVLMPRLDGYQTCALIKHNSVFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAEEQPAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=917675 U9R80_RS01835 WP_301838396.1 415104..415514(+) (pilG) [Pseudomonas sp. JQ170C]
ATGGAACAGCCCGGCGCGGCACTGAAGGTGATGGTGATCGATGACTCGAAGACGATTCGCCGCACCGCCCAGATGTTGCT
CAGCGAAGCAGGGTGCGAAGTCATCACGGCCACCGACGGGTTCGACGCCCTGGCCAAGATTGTCGACCAGCACCCGCAGA
TCATATTCGTCGACGTGCTGATGCCACGTCTGGACGGCTACCAGACCTGCGCTCTGATCAAACACAACAGCGTCTTCAAG
GACACGCCGGTGATTCTGCTGTCGTCCCGTGATGGCCTGTTCGACAAGGCAAGGGGCCGCGTGGTTGGCTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTGGATGCAATCCGCGCGCATGTGCCCGGGTTCGCCGCAGAAGAACAAC
CCGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.6

91.912

0.64