Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AB0R82_RS05525 Genome accession   NZ_CP160220
Coordinates   1059835..1060578 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain JM553     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1054835..1065578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS05490 (AB0R82_05490) yhaI 1055164..1055505 (+) 342 WP_009966921.1 YhaI family protein -
  AB0R82_RS05495 (AB0R82_05495) scoC 1055502..1056113 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  AB0R82_RS05500 (AB0R82_05500) yhaH 1056291..1056647 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  AB0R82_RS05505 (AB0R82_05505) - 1056777..1056968 (+) 192 WP_014476318.1 hypothetical protein -
  AB0R82_RS05510 (AB0R82_05510) trpP 1057042..1057560 (-) 519 WP_198878829.1 tryptophan transporter -
  AB0R82_RS05515 (AB0R82_05515) serC 1057684..1058763 (-) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  AB0R82_RS05520 (AB0R82_05520) hinT 1058910..1059347 (-) 438 WP_080529127.1 HIT family protein -
  AB0R82_RS05525 (AB0R82_05525) pptA 1059835..1060578 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  AB0R82_RS05530 (AB0R82_05530) ecsB 1060571..1061797 (+) 1227 WP_048654855.1 ABC transporter permease EcsB -
  AB0R82_RS05535 (AB0R82_05535) ecsC 1061817..1062527 (+) 711 WP_038427569.1 EcsC family protein -
  AB0R82_RS05540 (AB0R82_05540) sndC 1062545..1063735 (-) 1191 WP_198878830.1 N-acetyl amino acid acetylase SndC -
  AB0R82_RS05545 (AB0R82_05545) - 1063807..1065198 (-) 1392 WP_101172518.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=917560 AB0R82_RS05525 WP_003233230.1 1059835..1060578(+) (pptA) [Bacillus subtilis strain JM553]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=917560 AB0R82_RS05525 WP_003233230.1 1059835..1060578(+) (pptA) [Bacillus subtilis strain JM553]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547