Detailed information NTG0917537

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AB0R82_RS01630
• Genome accession: NZ_CP160220
• Coordinates: 293935..295056 (+)
• Length: 373 a.a.
• NCBI ID: WP_198879038.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JM553
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 288935..300056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R82_RS01605 (AB0R82_01605)	ycdA	288941..290005 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
AB0R82_RS01610 (AB0R82_01610)	-	290028..290159 (-)	132	WP_120363245.1	hypothetical protein	-
AB0R82_RS01615 (AB0R82_01615)	ycdB	290333..291753 (+)	1421	Protein_273	YcdB/YcdC domain-containing protein	-
AB0R82_RS01620 (AB0R82_01620)	ycdC	291940..293301 (+)	1362	WP_366592147.1	YcdB/YcdC domain-containing protein	-
AB0R82_RS01625 (AB0R82_01625)	cwlK	293309..293812 (-)	504	WP_120363247.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
AB0R82_RS01630 (AB0R82_01630)	rapF	293935..295056 (+)	1122	WP_198879038.1	response regulator aspartate phosphatase RapJ	Regulator
AB0R82_RS01635 (AB0R82_01635)	ycdF	295163..295939 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
AB0R82_RS01640 (AB0R82_01640)	ycdG	295964..297649 (+)	1686	WP_198879039.1	alpha-glucosidase	-
AB0R82_RS01645 (AB0R82_01645)	znuA	297837..298796 (+)	960	WP_086343416.1	metal ABC transporter substrate-binding protein	-
AB0R82_RS01650 (AB0R82_01650)	znuC	298852..299547 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44382.25 Da
• Isoelectric Point: 4.8344

>NTDB_id=917537 AB0R82_RS01630 WP_198879038.1 293935..295056(+) (rapF) [Bacillus subtilis strain JM553]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DLLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=917537 AB0R82_RS01630 WP_198879038.1 293935..295056(+) (rapF) [Bacillus subtilis strain JM553]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATTTGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATATGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGATCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.663	98.66	0.421
rapC	Bacillus subtilis subsp. subtilis str. 168	41.53	98.123	0.408