Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   AB0R82_RS00220 Genome accession   NZ_CP160220
Coordinates   41104..41931 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain JM553     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36104..46931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS00195 (AB0R82_00195) efpO 37167..38609 (+) 1443 WP_198879160.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  AB0R82_RS00200 (AB0R82_00200) tmk 38606..39244 (+) 639 WP_015715093.1 dTMP kinase -
  AB0R82_RS00205 (AB0R82_00205) darA 39318..39647 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  AB0R82_RS00210 (AB0R82_00210) yaaR 39660..40100 (+) 441 WP_009966249.1 YaaR family protein -
  AB0R82_RS00215 (AB0R82_00215) holB 40112..41101 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  AB0R82_RS00220 (AB0R82_00220) yaaT 41104..41931 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  AB0R82_RS00225 (AB0R82_00225) yabA 41946..42305 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  AB0R82_RS00230 (AB0R82_00230) trmNF 42364..43107 (+) 744 WP_198879161.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  AB0R82_RS00235 (AB0R82_00235) yazA 43094..43393 (+) 300 WP_014475567.1 GIY-YIG nuclease family protein -
  AB0R82_RS00240 (AB0R82_00240) rsmI 43368..44246 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  AB0R82_RS00245 (AB0R82_00245) abrB 44295..44585 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=917529 AB0R82_RS00220 WP_003226767.1 41104..41931(+) (yaaT) [Bacillus subtilis strain JM553]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=917529 AB0R82_RS00220 WP_003226767.1 41104..41931(+) (yaaT) [Bacillus subtilis strain JM553]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAACGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGCCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996