Detailed information NTG0091738

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCV52_RS12765
• Genome accession: NZ_AP025465
• Coordinates: 2795079..2798468 (+)
• Length: 1129 a.a.
• NCBI ID: WP_137407255.1
• Uniprot ID: A0A7V7NVD3
• Organism: Vibrio chagasii strain LMG 21353
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2790079..2803468

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV52_RS12740	erpA	2790377..2790718 (-)	342	WP_004738231.1	iron-sulfur cluster insertion protein ErpA	-
OCV52_RS12745	hemL	2791015..2792310 (+)	1296	WP_102425339.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCV52_RS12750	-	2792442..2792567 (-)	126	WP_019824360.1	hypothetical protein	-
OCV52_RS12755	-	2792644..2793729 (+)	1086	WP_137407257.1	AI-2E family transporter	-
OCV52_RS12760	rsmC	2793840..2794862 (+)	1023	WP_137407256.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCV52_RS12765	chiS	2795079..2798468 (+)	3390	WP_137407255.1	response regulator	Regulator
OCV52_RS12770	-	2799170..2800852 (+)	1683	WP_137407254.1	ABC transporter substrate-binding protein	-
OCV52_RS12775	-	2801022..2802008 (+)	987	WP_004738220.1	ABC transporter permease	-
OCV52_RS12780	-	2802011..2803036 (+)	1026	WP_105025504.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127284.93 Da
• Isoelectric Point: 5.4892

>NTDB_id=91738 OCV52_RS12765 WP_137407255.1 2795079..2798468(+) (chiS) [Vibrio chagasii strain LMG 21353]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARNNAQQRYIQGSGDQIKTSILPESSSYIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKNDDYGTNLLTGKYKDSNLGVTFKRLAKDVTDRRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGSDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTQNQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVVVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIRDKMQLIKNQNDELEDNLKTIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATEEELKNYNESGSYSHFKAPDLIDNTQQENSVINENP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCETLRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELSARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLRVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDAMSN
AILYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=91738 OCV52_RS12765 WP_137407255.1 2795079..2798468(+) (chiS) [Vibrio chagasii strain LMG 21353]
ATGTTTAGATTTTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAACACCCTAATGCTGGCATTTCTTGTCCTTAGTATTAC
TCCAGTGACACTTATCGCGATATTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CTGTTCGTGATACTAAGCAACAACAGATTGTCGACTACCTACAGGCTCAAGAATCCCAAGTCATGGGCTTTGTTCGCTCA
GAACTAGCCAATGCCAGTGGCGGACGCTTCTATGGCTTAATCAATGCCTTCCAACGCCTAGGCTTGGATATTGACGAAGC
TCGCAACAATGCTCAGCAACGTTATATCCAAGGTTCTGGTGATCAGATCAAAACATCCATTCTTCCAGAATCAAGCAGCT
ATATTGGTAGTGAACGTTATCGCCTACTGCATAAGCGCTATCATAACGCCTATCTAGAGTTGCTTAAGCGCTCCGATTTT
GACGATATTTTATTGGTTGATATCAACGGTAACGTTGCTTACTCCGTCTTCAAAAATGACGATTACGGCACTAACTTGCT
GACTGGTAAGTACAAGGACTCAAACCTAGGTGTTACTTTCAAGCGCCTGGCTAAAGACGTCACAGACCGACGCAAGTCAA
ATGAAGATTACACACCAGTTATTGTCTCTGACTTTAAGGACGAGAACGGTAAACAGACGGCATGGTTAGGCGCACCTATC
GTGCAGCAAGGTTACTTACACAGTTACGCGATGTTTAGGCTGCCAATCAACGGCATCACTAAGCTGATTGCCGATCTAAA
CAAGAGCTCAAACATTCAAACTTTGCTCGTTGGTAGTGACCACTTACCTCGTAGCCTCGCTCATTCGCAAGAATCTATAA
ATCTAAGCCTAGATGTAGTGGACAAAGCACTAGCAGGCGAAACCGCTGTTGGCACATTCGATAACACCCAGAATCAAGCC
ATCATTGCGGCCTATACACCTATTGAGCTTAAGTACGCCACTTGGGCTTTGGTCGTTGAGCTTCCAGAAAAAGAAGCCTT
CGCACGTATTCACCAGCTAGAAAAGATCTTTGTTATCGTCATGCTCACCGCCATCATTCTAGTGGTGGTTGCATCGCACT
ATTTATCAAACTTCATCACCTCCCCGCTGCTTAAACTGACATGGGCAGCCGAGAAAGTCTCTGCCGGTGACCTTGATGAA
ACCATGATCAATACAGAGCGCAAAGACGAAATCGGTCGCTTGGCTGTCAGCTTTGAGCGAATGCAACGTTCAATTCGTGA
CAAGATGCAGCTGATCAAAAATCAAAATGATGAACTTGAGGACAACCTTAAGACCATTCAGAAACAAAATGATGAGTTGC
AGCTCGCCAACAAACTCAAAGATGAATTCTTAGCAACCACCTCACACGAATTGAGAACACCACTGCATGGTATGGTTGGT
ATTGCTGAAGCATTGATATCGGGTGCGAATGGCCCTATTCCGGCGAACCAGAAATACCAGTTGGATATCATCATCAACAG
TGGTCAGCGACTAGCAACCTTGGTTGATGATCTGCTTGATTATCACAAGATGCGTTACGGTAGCTTGGACATTAAGAAAT
CTGCGGTTGATCTGTCTGCTGCCACCAGCTTGGTGCTTGAGCTATCTCATCACCTGTTGGGCAATAAACCGATTCGTATT
ATTAACCAAGTGCCGAGTGATTTAGGGCTAGTATCGTCCGATCCTCAGCGCCTTGAGCAGGTGATGTATAACTTGGTCGG
CAATGCCATCAAGTACACATCAGAAGGTAAAATCGTTATCTCTGCGAGCGTAATCGACGACAACATTCGTGTGCAAGTGG
TCGATACTGGTCAAGGCATACCAGCAGAGTATCTTGAACATATCTTCGAACCCCTGATTCAAGCAGGCCAAGACGCCAGT
AACTATCGCCAAGGTGCAGGCCTTGGCTTATCGATCAGTCGCCAGTTAATTGAATTAATGGGTGGTTCGCTATACGTAAG
TAGCCAGCCAATGCTAGGTACTACGTTCAGTTTTACTCTGCCTCTGGCGACAGAAGAAGAACTTAAAAACTACAACGAAT
CAGGTAGCTACTCACACTTCAAAGCGCCTGACTTGATTGATAACACACAGCAAGAAAACAGCGTCATCAATGAGAACCCT
GATGGTCCACTGCTGGTTATCGCGGATGATGAACCCGTTAACCTTCGTGTACTAGACAGCTTCTTGAAACTAGAAGGCTA
TCGAGTACGTACAGCCTGCGATGGCCCTGAAACCATCGAGTTGATTGAAAAAGAGAAGCCAGAACTATTGCTCCTCGATA
TCATGATGCCGGGCATGAGCGGCTATCAAGTGTGTGAAACACTGCGTAAGCAATATGACCATGCGCAACTACCGATCATA
ATGCTGACCGCGCTCAACCAAGCAGAAGACCGTGTACGCGGCTTCGAAGCTGGCGCTAATGACTATTTGTCTAAGCCATT
CAACAAACAAGAGCTATCAGCTCGAATCACAGCACATCTATCAGCAAGTAAAGCTGAGCAGAGACGCCTTGAGAACGACC
AACTACAACTAGAGCTCAAGCACAGAGCGATGGTTGAAGCTAACTTGCTAGAAACTCAAGGACGTTTACTCGAGCAGCTA
GAATCTGCACCAGAGGCCATCATCTGCATTCGTGATGACCAACGTATTCGCTTTGCCAACGAAGCGGCAGCTAAACTCTT
TAGGCGCGGACAAGAGCAACTTAAGCGCTCAATGGCCGACGAAATCATCGCGCCTAAATACCTGAGAGTGGAACAAGCAC
ACTACTGTGGCGATATCGACATCTATATAGATGACACTCGTCAGCGCATACCGAGTGACATCCTCAAGTTACCTGAAGGC
TCAGGGCTAGACACCATGTACATATTCAATGTTGGCGGTGGCGTTAACTCAAACCGTATCAATAACCTTGAGACGGCTGT
TGAAGCGCTTTCTAGCTATGCCTTTGAAGGTGATAAGGACAAGCTTCAGCAGCTGAAAGAACTAGGCGGAGAGTTTACAC
GCTTAGCAGATAAAGCCACAGGAGAAGGTAAAAACAAGCAAGAGTTAATGCGTGAAGTCTTAGTCGACGCGATGAGCAAC
GCCATCCTATACTGGGAATCGGTTACCGGAGAAACCAAGTTTGCGTTCGCAGAGAAGAGTGGCTTATGGCGCGTTTATCT
AGACAGAAGCACACTACAAACGCGAACGTTAGACAAATACCTACGTGTAGAAACGCTGCCTAAAACACCTCGCTGGCGAA
CAGTACTAAGCTCTATCGAGTTCATTCTCGAACACTGTAAAGAACAGACACCAGAGAGAACGCACATTGAGATGCTCAGA
GACAAACTACAGAAGTTACTGACCAGTTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS domain (PAS_8) (880-915)

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

3D structure

• AlphaFold DB: A0A7V7NVD3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.616	100	0.766