Detailed information NTG0917282

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB0U07_RS00295
• Genome accession: NZ_CP160125
• Coordinates: 49651..50676 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 729_021014_1_4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 44651..55676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0U07_RS00265	zapB	44735..44980 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AB0U07_RS00270	rraA	45065..45550 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB0U07_RS00275	menA	45643..46569 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB0U07_RS00280	hslU	46636..47967 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AB0U07_RS00285	hslV	47977..48507 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
AB0U07_RS00290	ftsN	48600..49559 (-)	960	WP_000068834.1	cell division protein FtsN	-
AB0U07_RS00295	cytR	49651..50676 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB0U07_RS00300	priA	50832..53030 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
AB0U07_RS00305	rpmE	53233..53445 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AB0U07_RS00310	yiiX	53506..54114 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
AB0U07_RS00315	metJ	54174..54491 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=917282 AB0U07_RS00295 WP_000644904.1 49651..50676(-) (cytR) [Escherichia coli strain 729_021014_1_4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=917282 AB0U07_RS00295 WP_000644904.1 49651..50676(-) (cytR) [Escherichia coli strain 729_021014_1_4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628