Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   OCV19_RS20710 Genome accession   NZ_AP025464
Coordinates   1062177..1063271 (-) Length   364 a.a.
NCBI ID   WP_065675851.1    Uniprot ID   A0A1C3JB84
Organism   Vibrio celticus strain CECT 7224     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 1057177..1068271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCV19_RS20690 - 1057897..1058205 (+) 309 WP_083994281.1 DUF1289 domain-containing protein -
  OCV19_RS20695 - 1058340..1058690 (-) 351 WP_065675854.1 HopJ type III effector protein -
  OCV19_RS20700 - 1058885..1059544 (+) 660 WP_065675853.1 PilZ domain-containing protein -
  OCV19_RS20705 luxQ 1059604..1062177 (-) 2574 WP_065675852.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  OCV19_RS20710 luxP 1062177..1063271 (-) 1095 WP_065675851.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  OCV19_RS20715 - 1063580..1063894 (-) 315 WP_019823424.1 GIY-YIG nuclease family protein -
  OCV19_RS20720 - 1063895..1064551 (-) 657 WP_019823422.1 YceH family protein -
  OCV19_RS20725 - 1064608..1064808 (-) 201 WP_065675850.1 hypothetical protein -
  OCV19_RS20730 - 1065004..1065318 (+) 315 WP_004730049.1 DUF496 family protein -
  OCV19_RS20735 - 1065545..1066171 (+) 627 WP_065675849.1 D-Ala-D-Ala carboxypeptidase family metallohydrolase -
  OCV19_RS20740 - 1066336..1066572 (+) 237 WP_065675848.1 hypothetical protein -

Sequence

Protein


Download         Length: 364 a.a.        Molecular weight: 41353.66 Da        Isoelectric Point: 5.1358

>NTDB_id=91720 OCV19_RS20710 WP_065675851.1 1062177..1063271(-) (luxP) [Vibrio celticus strain CECT 7224]
MKRLLMLFGLAVFSASALSHGTHVLNGYWEYQDYLSIFPEQKALTDKMVEAVQNHPVPLRRIQDEPITISVVYPGQQISD
YWVRNIQAFEKRLDRLKIRYQINQVFTRINADLAQQSISLQEAIENKTDYLIFTLDTTRHRKFIEHVLTSTDTKLILQNI
TTPVRAWADRQPFMYVGFDHATGSLKLADYFKQVSPPDSKYSVLYYSQGYISDARGDTFIHEVNTDTNFTLKSSFYTKSN
KDSGYQAAKISIENDKDLDFIYACSTDVALGAMEAIRESGQDILVNGWGGGSAELEAIARGDLDVTVMRMNDDTGIAMAE
AIKWDLAGLEVPTVYSGEFEIVTKEDSPERISELKQRAFRYSGH

Nucleotide


Download         Length: 1095 bp        

>NTDB_id=91720 OCV19_RS20710 WP_065675851.1 1062177..1063271(-) (luxP) [Vibrio celticus strain CECT 7224]
ATGAAACGTTTACTGATGTTGTTTGGACTTGCCGTATTTTCTGCGTCCGCTCTCTCCCATGGTACTCATGTCCTCAATGG
GTACTGGGAATACCAAGATTATCTTTCCATTTTTCCAGAGCAAAAAGCATTGACCGATAAAATGGTCGAGGCTGTACAAA
ATCACCCTGTGCCATTGAGAAGAATCCAAGACGAACCAATTACGATTTCCGTGGTGTATCCGGGTCAACAGATCTCGGAT
TACTGGGTTCGTAATATTCAAGCTTTTGAGAAGCGTCTCGATAGGCTGAAGATCCGCTACCAAATAAATCAAGTATTTAC
CCGTATTAATGCCGATCTCGCGCAGCAGAGTATTTCGTTGCAAGAAGCGATTGAAAACAAGACGGATTATTTGATTTTCA
CACTAGATACCACGCGCCACCGCAAGTTTATCGAGCACGTGTTGACCTCTACTGACACCAAACTCATTCTGCAAAATATC
ACGACGCCAGTGCGAGCTTGGGCAGATAGACAGCCATTTATGTATGTGGGTTTTGACCATGCGACAGGCAGCTTAAAACT
GGCGGACTATTTTAAACAAGTAAGTCCACCAGACAGTAAGTATTCTGTTTTGTATTACTCACAAGGCTATATCAGTGATG
CGCGTGGAGATACTTTTATCCATGAAGTGAATACTGATACCAACTTTACCCTTAAGTCTTCGTTTTACACAAAATCAAAC
AAAGACAGTGGCTACCAAGCGGCTAAAATCAGCATAGAGAACGATAAGGATCTAGACTTTATCTATGCATGTTCAACGGA
TGTCGCTCTCGGTGCAATGGAAGCGATTCGTGAATCGGGCCAAGACATCTTAGTGAATGGTTGGGGAGGCGGCTCTGCTG
AACTTGAAGCCATTGCAAGGGGCGACCTAGATGTTACTGTCATGCGTATGAACGACGATACAGGCATTGCAATGGCAGAG
GCGATCAAGTGGGATCTAGCCGGTTTGGAAGTGCCTACCGTTTACTCTGGTGAATTTGAAATTGTCACCAAGGAAGATTC
CCCAGAACGTATTTCAGAACTTAAACAGCGGGCATTTAGGTACTCAGGTCACTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(69-322)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C3JB84

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

62.842

100

0.632

Multiple sequence alignment