Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   VI606_RS06045 Genome accession   NZ_CP141537
Coordinates   1276409..1277035 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain EB3_SW1_43.22_ST134     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1271409..1282035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VI606_RS06025 (VI606_06025) - 1271808..1273568 (-) 1761 WP_045347804.1 Lon protease family protein -
  VI606_RS06030 (VI606_06030) matP 1273755..1274207 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  VI606_RS06035 (VI606_06035) ompA 1274273..1275325 (-) 1053 WP_108376575.1 porin OmpA -
  VI606_RS06040 (VI606_06040) sulA 1275682..1276191 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  VI606_RS06045 (VI606_06045) sxy/tfoX 1276409..1277035 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  VI606_RS06050 (VI606_06050) yccS 1276992..1279154 (-) 2163 WP_045347803.1 YccS family putative transporter -
  VI606_RS06055 (VI606_06055) - 1279173..1279619 (-) 447 WP_015570894.1 YccF domain-containing protein -
  VI606_RS06060 (VI606_06060) helD 1279742..1281796 (+) 2055 WP_045347802.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=917167 VI606_RS06045 WP_017384804.1 1276409..1277035(+) (sxy/tfoX) [Enterobacter hormaechei strain EB3_SW1_43.22_ST134]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=917167 VI606_RS06045 WP_017384804.1 1276409..1277035(+) (sxy/tfoX) [Enterobacter hormaechei strain EB3_SW1_43.22_ST134]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACACTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572