Detailed information NTG0917157

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: UXR57_RS24440
• Genome accession: NZ_CP141536
• Coordinates: 5327224..5328444 (+)
• Length: 406 a.a.
• NCBI ID: WP_016449076.1
• Uniprot ID: A0AAU0LD35
• Organism: Delftia lacustris strain LzhVag01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5322224..5333444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UXR57_RS24420	coaD	5322994..5323494 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
UXR57_RS24425	rsmD	5323625..5324332 (-)	708	WP_016449073.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
UXR57_RS24430	-	5324329..5325690 (-)	1362	WP_034366109.1	M16 family metallopeptidase	-
UXR57_RS24435	-	5325717..5327195 (-)	1479	WP_034366071.1	M16 family metallopeptidase	-
UXR57_RS24440	pilA	5327224..5328444 (+)	1221	WP_016449076.1	signal recognition particle-docking protein FtsY	Machinery gene
UXR57_RS24445	-	5328715..5329704 (+)	990	WP_096915397.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
UXR57_RS24450	cutA	5329691..5330089 (-)	399	WP_034366069.1	divalent-cation tolerance protein CutA	-
UXR57_RS24455	-	5330142..5331167 (-)	1026	WP_244387249.1	2-dehydropantoate 2-reductase	-
UXR57_RS24460	-	5331186..5332019 (-)	834	WP_264675423.1	class II aldolase/adducin family protein	-
UXR57_RS24465	-	5332012..5332557 (-)	546	WP_034366065.1	MarR family winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42448.31 Da
• Isoelectric Point: 5.5266

>NTDB_id=917157 UXR57_RS24440 WP_016449076.1 5327224..5328444(+) (pilA) [Delftia lacustris strain LzhVag01]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTDLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=917157 UXR57_RS24440 WP_016449076.1 5327224..5328444(+) (pilA) [Delftia lacustris strain LzhVag01]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACGCCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAGCAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGACCTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.502