Detailed information NTG0091708

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK19_RS20995
• Genome accession: NZ_AP027902
• Coordinates: 4319464..4320489 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2018-11-1BCC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4314464..4325489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK19_RS20975 (VEE49_40370)	metJ	4315525..4315842 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABK19_RS20980 (VEE49_40380)	yiiX	4316026..4316634 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK19_RS20985 (VEE49_40390)	rpmE	4316695..4316907 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK19_RS20990 (VEE49_40400)	priA	4317110..4319308 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AABK19_RS20995 (VEE49_40410)	cytR	4319464..4320489 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK19_RS21000 (VEE49_40420)	ftsN	4320581..4321540 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABK19_RS21005 (VEE49_40430)	hslV	4321633..4322163 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK19_RS21010 (VEE49_40440)	hslU	4322173..4323504 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK19_RS21015 (VEE49_40450)	menA	4323571..4324497 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK19_RS21020 (VEE49_40460)	rraA	4324590..4325075 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK19_RS21025 (VEE49_40470)	zapB	4325160..4325405 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91708 AABK19_RS20995 WP_000644904.1 4319464..4320489(+) (cytR) [Escherichia coli strain 2018-11-1BCC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91708 AABK19_RS20995 WP_000644904.1 4319464..4320489(+) (cytR) [Escherichia coli strain 2018-11-1BCC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628