Detailed information NTG0916884

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: U4959_RS07430
• Genome accession: NZ_CP141284
• Coordinates: 1576497..1577225 (+)
• Length: 242 a.a.
• NCBI ID: WP_227545354.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain H1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1571497..1582225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U4959_RS07395 (U4959_07395)	kdsB	1571689..1572450 (+)	762	WP_004962209.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
U4959_RS07400 (U4959_07400)	-	1572452..1573438 (+)	987	WP_005402538.1	DNA polymerase III subunit delta'	-
U4959_RS07405 (U4959_07405)	-	1573665..1574009 (+)	345	WP_005402539.1	PilZ domain-containing protein	-
U4959_RS07410 (U4959_07410)	-	1574032..1574805 (+)	774	WP_005402540.1	TatD family hydrolase	-
U4959_RS07415 (U4959_07415)	-	1574844..1575452 (+)	609	WP_020899852.1	TetR/AcrR family transcriptional regulator	-
U4959_RS07420 (U4959_07420)	-	1575465..1576013 (+)	549	WP_005402541.1	Tfp pilus assembly protein FimT/FimU	-
U4959_RS07425 (U4959_07425)	xcpV	1576027..1576500 (+)	474	WP_324273063.1	type II secretion system minor pseudopilin GspI	Machinery gene
U4959_RS07430 (U4959_07430)	xcpW	1576497..1577225 (+)	729	WP_227545354.1	type II secretion system minor pseudopilin GspJ	Machinery gene
U4959_RS07435 (U4959_07435)	gspK	1577222..1578181 (+)	960	WP_282896509.1	type II secretion system minor pseudopilin GspK	-
U4959_RS07440 (U4959_07440)	-	1578288..1578884 (+)	597	WP_004954093.1	6-pyruvoyl trahydropterin synthase family protein	-
U4959_RS07445 (U4959_07445)	ung	1578923..1579636 (+)	714	WP_004911491.1	uracil-DNA glycosylase	-
U4959_RS07450 (U4959_07450)	-	1579633..1580757 (+)	1125	WP_171053792.1	enoyl-CoA hydratase/isomerase family protein	-
U4959_RS07455 (U4959_07455)	tadA	1580764..1581267 (+)	504	WP_282896510.1	tRNA adenosine(34) deaminase TadA	-
U4959_RS07460 (U4959_07460)	-	1581334..1581774 (+)	441	WP_075696895.1	SRPBCC family protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 27945.27 Da
• Isoelectric Point: 9.0888

>NTDB_id=916884 U4959_RS07430 WP_227545354.1 1576497..1577225(+) (xcpW) [Acinetobacter junii strain H1]
MKIKNVVMRLGFRFNVVSECQQSSTKSYLPKKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTANDGRQLQAAMVLNDRSFSFSKAGVSDPLKQDLSPYERIEYRYDAQQKKVYRLKYTNLNI
PNRVQPVSSTLLENVDQFRILILNPQEISQWPENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNLET
PP

Nucleotide

• Length: 729 bp

>NTDB_id=916884 U4959_RS07430 WP_227545354.1 1576497..1577225(+) (xcpW) [Acinetobacter junii strain H1]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTTCAGATTTAATGTTGTCTCAGAATGTCAGCAAAGTTCAACTAAGTC
TTATTTACCTAAAAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATATTTGCAGTGC
TTTCAATGTTGGGGTGGAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTTTAAAAGATAGCATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGGGTATCTGATCCATTGAAGCAAGATCTTT
CACCATATGAGCGAATAGAATACAGATATGATGCGCAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACTTTACTTGAAAATGTAGATCAATTTAGAATTTTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTC
AATTGACGATTGCTGGTTCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCTGGAAACT
CCACCATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	71.728	78.926	0.566