Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   U7118_RS20490 Genome accession   NZ_CP141283
Coordinates   3801322..3801462 (-) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_09     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3796322..3806462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS20490 (U7118_20490) comS 3801322..3801462 (-) 141 WP_225910706.1 competence protein ComS Regulator
  U7118_RS20495 (U7118_20495) srfAB 3801554..3804598 (-) 3045 Protein_4032 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=916856 U7118_RS20490 WP_225910706.1 3801322..3801462(-) (comS) [Bacillus subtilis strain DKU_09]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=916856 U7118_RS20490 WP_225910706.1 3801322..3801462(-) (comS) [Bacillus subtilis strain DKU_09]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978