Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   U7118_RS17965 Genome accession   NZ_CP141283
Coordinates   3298730..3299524 (-) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_09     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3293730..3304524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS17930 (U7118_17930) ephM 3294573..3295433 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  U7118_RS17935 (U7118_17935) spdL 3295420..3295752 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  U7118_RS17940 (U7118_17940) yfhK 3295837..3296355 (-) 519 WP_014479218.1 SH3 domain-containing protein -
  U7118_RS17945 (U7118_17945) yfhJ 3296500..3296769 (-) 270 WP_324271351.1 YfhJ family protein -
  U7118_RS17950 (U7118_17950) sspK 3296894..3297046 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  U7118_RS17955 (U7118_17955) yfhI 3297078..3298271 (-) 1194 WP_003243500.1 MFS transporter -
  U7118_RS17960 (U7118_17960) yfhH 3298414..3298728 (-) 315 WP_003244592.1 YfhH family protein -
  U7118_RS17965 (U7118_17965) recX 3298730..3299524 (-) 795 WP_014479217.1 recombination regulator RecX Regulator
  U7118_RS17970 (U7118_17970) yfhF 3299613..3300524 (+) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  U7118_RS17975 (U7118_17975) yfhE 3300579..3300689 (+) 111 WP_003223230.1 YfhE family protein -
  U7118_RS17980 (U7118_17980) yfhD 3300756..3300947 (+) 192 WP_003233561.1 YfhD family protein -
  U7118_RS17985 (U7118_17985) yfhC 3300986..3301570 (-) 585 WP_032723010.1 nitroreductase -
  U7118_RS17990 (U7118_17990) yfhB 3301658..3302539 (-) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  U7118_RS17995 (U7118_17995) sxzA 3302654..3303685 (-) 1032 WP_003233568.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=916851 U7118_RS17965 WP_014479217.1 3298730..3299524(-) (recX) [Bacillus subtilis strain DKU_09]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=916851 U7118_RS17965 WP_014479217.1 3298730..3299524(-) (recX) [Bacillus subtilis strain DKU_09]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992