Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   U7118_RS14760 Genome accession   NZ_CP141283
Coordinates   2715048..2715512 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain DKU_09     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2710048..2720512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS14740 (U7118_14740) fadH 2711236..2712000 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  U7118_RS14745 (U7118_14745) ppeE 2712143..2713003 (+) 861 WP_003232400.1 metallophosphoesterase -
  U7118_RS14750 (U7118_14750) ltdD 2713060..2713554 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  U7118_RS14755 (U7118_14755) ykuC 2713630..2714922 (+) 1293 WP_014479656.1 MFS transporter -
  U7118_RS14760 (U7118_14760) kre 2715048..2715512 (+) 465 WP_003232406.1 YkyB family protein Regulator
  U7118_RS14765 (U7118_14765) cheV 2715556..2716467 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  U7118_RS14770 (U7118_14770) - 2716671..2716832 (+) 162 WP_003245246.1 hypothetical protein -
  U7118_RS14775 (U7118_14775) dapX 2717034..2718215 (+) 1182 WP_014479654.1 aminotransferase A -
  U7118_RS14780 (U7118_14780) kinA 2718212..2720044 (-) 1833 WP_324271309.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=916835 U7118_RS14760 WP_003232406.1 2715048..2715512(+) (kre) [Bacillus subtilis strain DKU_09]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=916835 U7118_RS14760 WP_003232406.1 2715048..2715512(+) (kre) [Bacillus subtilis strain DKU_09]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1