Detailed information NTG0916690

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ABZS46_RS07065
• Genome accession: NZ_CP160098
• Coordinates: 1459068..1460150 (+)
• Length: 360 a.a.
• NCBI ID: WP_412521711.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain C_01_sau
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1454068..1465150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZS46_RS07045 (ABZS46_07045)	gdpS	1454446..1455516 (-)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-
ABZS46_RS07050 (ABZS46_07050)	-	1455834..1456889 (+)	1056	WP_000258149.1	glycosyltransferase family 4 protein	-
ABZS46_RS07055 (ABZS46_07055)	-	1457053..1457694 (-)	642	WP_000192942.1	YigZ family protein	-
ABZS46_RS07060 (ABZS46_07060)	fakB1	1457838..1458704 (+)	867	WP_000686344.1	fatty acid kinase binding subunit FakB1	-
ABZS46_RS07065 (ABZS46_07065)	comFA	1459068..1460150 (+)	1083	WP_412521711.1	DEAD/DEAH box helicase family protein	Machinery gene
ABZS46_RS07070 (ABZS46_07070)	-	1460143..1460817 (+)	675	WP_001057974.1	ComF family protein	-
ABZS46_RS07075 (ABZS46_07075)	hpf	1460878..1461450 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ABZS46_RS07080 (ABZS46_07080)	secA	1461865..1464396 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
ABZS46_RS07085 (ABZS46_07085)	-	1464438..1464536 (+)	99	WP_031789464.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 41982.46 Da
• Isoelectric Point: 9.7563

>NTDB_id=916690 ABZS46_RS07065 WP_412521711.1 1459068..1460150(+) (comFA) [Staphylococcus aureus strain C_01_sau]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENVIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINKQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGQFDVIFTTTILERGFTMANLDAVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=916690 ABZS46_RS07065 WP_412521711.1 1459068..1460150(+) (comFA) [Staphylococcus aureus strain C_01_sau]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCCTATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATGTAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTCAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAAACAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACAATTTGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGCGGTTGTTATCGATGCGCATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (214-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369