Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   U6I89_RS07810 Genome accession   NZ_CP141263
Coordinates   1585569..1586033 (-) Length   154 a.a.
NCBI ID   WP_003238939.1    Uniprot ID   A0A9W5LHE5
Organism   Bacillus inaquosorum strain BIM B-2002     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1580569..1591033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U6I89_RS07790 (U6I89_07790) kinA 1581035..1582867 (+) 1833 WP_104010206.1 sporulation histidine kinase KinA -
  U6I89_RS07795 (U6I89_07795) - 1582864..1584045 (-) 1182 WP_003238945.1 aminotransferase A -
  U6I89_RS07800 (U6I89_07800) - 1584247..1584408 (-) 162 WP_003238943.1 hypothetical protein -
  U6I89_RS07805 (U6I89_07805) cheV 1584615..1585526 (+) 912 WP_032732103.1 chemotaxis protein CheV -
  U6I89_RS07810 (U6I89_07810) kre 1585569..1586033 (-) 465 WP_003238939.1 YkyB family protein Regulator
  U6I89_RS07815 (U6I89_07815) - 1586159..1587451 (-) 1293 WP_060398517.1 MFS transporter -
  U6I89_RS07820 (U6I89_07820) - 1587527..1588021 (-) 495 WP_080429098.1 L,D-transpeptidase family protein -
  U6I89_RS07825 (U6I89_07825) - 1588078..1588938 (-) 861 WP_060398519.1 metallophosphoesterase -
  U6I89_RS07830 (U6I89_07830) fadH 1589081..1589845 (+) 765 WP_060398520.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17904.72 Da        Isoelectric Point: 10.3545

>NTDB_id=916544 U6I89_RS07810 WP_003238939.1 1585569..1586033(-) (kre) [Bacillus inaquosorum strain BIM B-2002]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAHMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=916544 U6I89_RS07810 WP_003238939.1 1585569..1586033(-) (kre) [Bacillus inaquosorum strain BIM B-2002]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCATATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994