Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   U6I89_RS04680 Genome accession   NZ_CP141263
Coordinates   958707..959498 (+) Length   263 a.a.
NCBI ID   WP_060398216.1    Uniprot ID   A0A9Q4HTI8
Organism   Bacillus inaquosorum strain BIM B-2002     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 953707..964498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U6I89_RS04650 (U6I89_04650) - 954547..955578 (+) 1032 WP_060398212.1 FecCD family ABC transporter permease -
  U6I89_RS04655 (U6I89_04655) - 955693..956574 (+) 882 WP_060398213.1 PhzF family phenazine biosynthesis isomerase -
  U6I89_RS04660 (U6I89_04660) - 956661..957245 (+) 585 WP_060398214.1 nitroreductase -
  U6I89_RS04665 (U6I89_04665) - 957284..957475 (-) 192 WP_019257831.1 YfhD family protein -
  U6I89_RS04670 (U6I89_04670) - 957542..957652 (-) 111 WP_003223230.1 YfhE family protein -
  U6I89_RS04675 (U6I89_04675) - 957707..958618 (-) 912 WP_060398215.1 TIGR01777 family oxidoreductase -
  U6I89_RS04680 (U6I89_04680) recX 958707..959498 (+) 792 WP_060398216.1 recombination regulator RecX Regulator
  U6I89_RS04685 (U6I89_04685) - 959507..959827 (+) 321 WP_019257834.1 YfhH family protein -
  U6I89_RS04690 (U6I89_04690) - 959965..961158 (+) 1194 WP_003239711.1 MFS transporter -
  U6I89_RS04695 (U6I89_04695) - 961312..961464 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  U6I89_RS04700 (U6I89_04700) - 961589..961858 (+) 270 WP_003239709.1 YfhJ family protein -
  U6I89_RS04705 (U6I89_04705) - 962003..962518 (+) 516 WP_060398217.1 SH3 domain-containing protein -
  U6I89_RS04710 (U6I89_04710) - 962606..962938 (+) 333 WP_060398218.1 SdpI family protein -
  U6I89_RS04715 (U6I89_04715) - 962925..963785 (+) 861 WP_060398219.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30872.10 Da        Isoelectric Point: 6.6695

>NTDB_id=916527 U6I89_RS04680 WP_060398216.1 958707..959498(+) (recX) [Bacillus inaquosorum strain BIM B-2002]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDHLKKKETSAPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=916527 U6I89_RS04680 WP_060398216.1 958707..959498(+) (recX) [Bacillus inaquosorum strain BIM B-2002]
ATGCCATTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGGTTCAATATTTTTCTGGATGAAAAATACGCCTT
CAGCGTGGACGCGGACGTGCTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGAATGAGGTCAACGAAAGAGGTT
GAGGACCACTTAAAGAAAAAAGAAACCTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTCAACGACTATAAGTACTT
AAATGATCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACGAATGGAAAAGGCCCTGACGTTTTGTTCAGAG
AGCTTAGAGCGAAGGGGATCGACGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACCAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAGGGTTTCTCATTTGATGTCATCAGCGCTGCGCTGGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.958

100

0.97