Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U3649_RS07265 Genome accession   NZ_CP141262
Coordinates   1742425..1742826 (+) Length   133 a.a.
NCBI ID   WP_407354189.1    Uniprot ID   -
Organism   Luteimonas sp. R10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1737425..1747826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U3649_RS07245 (U3649_07210) tsaB 1738731..1739441 (+) 711 WP_407354185.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  U3649_RS07250 (U3649_07215) lepB 1739547..1740176 (+) 630 WP_407354186.1 signal peptidase I -
  U3649_RS07255 (U3649_07220) - 1740296..1741174 (-) 879 WP_407354187.1 energy transducer TonB -
  U3649_RS07260 (U3649_07225) gshB 1741283..1742239 (-) 957 WP_407354188.1 glutathione synthase -
  U3649_RS07265 (U3649_07230) pilG 1742425..1742826 (+) 402 WP_407354189.1 twitching motility response regulator PilG Regulator
  U3649_RS07270 (U3649_07235) - 1742846..1743217 (+) 372 WP_407354190.1 response regulator -
  U3649_RS07275 (U3649_07240) - 1743214..1743771 (+) 558 WP_407354191.1 chemotaxis protein CheW -
  U3649_RS07280 (U3649_07245) - 1743804..1745825 (+) 2022 WP_407354192.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 15036.38 Da        Isoelectric Point: 8.0329

>NTDB_id=916503 U3649_RS07265 WP_407354189.1 1742425..1742826(+) (pilG) [Luteimonas sp. R10]
MTQDEKRAGSLDGLRVMVIDDSKTIRRTAETLLRREGAEVTTAVDGFEALAKIADQHPQIIFVDIMMPRLDGYQTCALIK
NNQLFRQMPVIMLSSKDGLFDKARGRIVGSEQYVTKPFTREELLDAIRKHVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=916503 U3649_RS07265 WP_407354189.1 1742425..1742826(+) (pilG) [Luteimonas sp. R10]
ATGACGCAAGACGAAAAACGCGCCGGCAGCCTCGATGGCTTGCGGGTGATGGTGATCGACGACTCGAAAACCATCCGCCG
GACCGCGGAGACGCTGCTCAGGCGCGAGGGGGCCGAGGTCACGACCGCGGTCGACGGCTTCGAGGCGCTGGCCAAGATCG
CCGACCAGCATCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTACCAGACCTGCGCCCTGATCAAG
AACAACCAGCTTTTCAGGCAGATGCCTGTCATCATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCGCGCGGCCGCAT
CGTGGGCTCGGAGCAGTACGTCACCAAACCATTCACGCGCGAGGAACTGCTCGACGCGATCCGCAAGCACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

93.233

0.684