Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U5817_RS21570 Genome accession   NZ_CP141259
Coordinates   4609850..4610245 (+) Length   131 a.a.
NCBI ID   WP_169127401.1    Uniprot ID   -
Organism   Aromatoleum evansii strain MAY27     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4604850..4615245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U5817_RS21550 (U5817_21490) mgtE 4604993..4606435 (+) 1443 WP_407278773.1 magnesium transporter -
  U5817_RS21555 (U5817_21495) hemL 4606540..4607823 (-) 1284 WP_407278774.1 glutamate-1-semialdehyde 2,1-aminomutase -
  U5817_RS21560 (U5817_21500) thiE 4607884..4608528 (-) 645 WP_407278775.1 thiamine phosphate synthase -
  U5817_RS21565 (U5817_21505) - 4608509..4609474 (-) 966 WP_169127399.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  U5817_RS21570 (U5817_21510) pilG 4609850..4610245 (+) 396 WP_169127401.1 PleD family two-component system response regulator Regulator
  U5817_RS21575 (U5817_21515) - 4610262..4610627 (+) 366 WP_169127403.1 PleD family two-component system response regulator -
  U5817_RS21580 (U5817_21520) - 4610634..4611149 (+) 516 WP_169127404.1 chemotaxis protein CheW -
  U5817_RS21585 (U5817_21525) - 4611217..4613352 (+) 2136 WP_169127406.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14251.56 Da        Isoelectric Point: 7.2436

>NTDB_id=916479 U5817_RS21570 WP_169127401.1 4609850..4610245(+) (pilG) [Aromatoleum evansii strain MAY27]
MDLTGLKVMVIDDSNTIRRSAEIFLTNSGCQVLLAEDGFDALAKIADHHPDVIFVDIMMPRLDGYQTCALIKKNPQLAAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVATHAARKAGTGL

Nucleotide


Download         Length: 396 bp        

>NTDB_id=916479 U5817_RS21570 WP_169127401.1 4609850..4610245(+) (pilG) [Aromatoleum evansii strain MAY27]
ATGGATCTGACCGGACTCAAGGTGATGGTGATCGACGACAGCAACACCATCCGCCGCAGCGCCGAGATTTTTCTCACCAA
CTCGGGCTGCCAGGTGCTGCTGGCGGAAGACGGCTTCGACGCCCTCGCGAAAATCGCCGACCACCATCCCGACGTGATCT
TCGTAGACATCATGATGCCGCGGCTCGACGGCTACCAGACCTGCGCGCTGATCAAGAAAAATCCGCAGCTCGCCGCGACC
CCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACCGCGCGCGCGGCCGCATGGTCGGATCCGACGAATACCTCAC
CAAGCCCTTCACCAAGGACAGCCTGCTCAAGGCGGTCGCCACCCATGCCGCGCGCAAGGCCGGCACGGGCCTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.213

93.13

0.626