Detailed information NTG0091630

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK27_RS21345
• Genome accession: NZ_AP027899
• Coordinates: 4445680..4446705 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2018-10-2CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4440680..4451705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK27_RS21335 (VEE75_40810)	rpmE	4442911..4443123 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK27_RS21340 (VEE75_40820)	priA	4443326..4445524 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
AABK27_RS21345 (VEE75_40830)	cytR	4445680..4446705 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK27_RS21350 (VEE75_40840)	ftsN	4446797..4447756 (+)	960	WP_000068834.1	cell division protein FtsN	-
AABK27_RS21355 (VEE75_40850)	hslV	4447849..4448379 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK27_RS21360 (VEE75_40860)	hslU	4448389..4449720 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
AABK27_RS21365 (VEE75_40870)	menA	4449787..4450713 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK27_RS21370 (VEE75_40880)	rraA	4450806..4451291 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK27_RS21375 (VEE75_40890)	zapB	4451376..4451621 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91630 AABK27_RS21345 WP_000644904.1 4445680..4446705(+) (cytR) [Escherichia coli strain 2018-10-2CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91630 AABK27_RS21345 WP_000644904.1 4445680..4446705(+) (cytR) [Escherichia coli strain 2018-10-2CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628