Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   U2H13_RS04385 Genome accession   NZ_CP141181
Coordinates   864808..865599 (+) Length   263 a.a.
NCBI ID   WP_376700691.1    Uniprot ID   -
Organism   Bacillus sp. A1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 859808..870599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2H13_RS04360 (U2H13_04350) - 861802..862686 (+) 885 WP_053285209.1 PhzF family phenazine biosynthesis isomerase -
  U2H13_RS04365 (U2H13_04355) - 862763..863347 (+) 585 WP_007408549.1 nitroreductase -
  U2H13_RS04370 (U2H13_04360) - 863387..863578 (-) 192 WP_003155508.1 YfhD family protein -
  U2H13_RS04375 (U2H13_04365) - 863649..863759 (-) 111 WP_003155504.1 YfhE family protein -
  U2H13_RS04380 (U2H13_04370) - 863817..864716 (-) 900 WP_376700690.1 TIGR01777 family oxidoreductase -
  U2H13_RS04385 (U2H13_04375) recX 864808..865599 (+) 792 WP_376700691.1 recombination regulator RecX Regulator
  U2H13_RS04390 (U2H13_04380) - 865606..865917 (+) 312 WP_025650230.1 YfhH family protein -
  U2H13_RS04395 (U2H13_04385) - 866064..867257 (+) 1194 WP_376700803.1 MFS transporter -
  U2H13_RS04400 (U2H13_04390) - 867297..867686 (-) 390 WP_061861286.1 DUF2606 family protein -
  U2H13_RS04405 (U2H13_04395) - 867649..868560 (-) 912 WP_029973980.1 serine protease -
  U2H13_RS04410 (U2H13_04400) - 868705..868857 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  U2H13_RS04415 (U2H13_04405) - 868981..869250 (+) 270 WP_003155492.1 YfhJ family protein -
  U2H13_RS04420 (U2H13_04410) - 869382..869909 (+) 528 WP_376700693.1 SH3 domain-containing protein -
  U2H13_RS04425 (U2H13_04415) - 869995..870330 (+) 336 WP_017419152.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30951.11 Da        Isoelectric Point: 6.0196

>NTDB_id=916224 U2H13_RS04385 WP_376700691.1 864808..865599(+) (recX) [Bacillus sp. A1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALTAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=916224 U2H13_RS04385 WP_376700691.1 864808..865599(+) (recX) [Bacillus sp. A1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTTGACGAGCTTGACATTCTTGAAATCC
AGCACGGTGATGACGTAAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGGCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGAAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGACGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791