Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ABXV02_RS16510 Genome accession   NZ_CP159912
Coordinates   3156794..3157537 (-) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain PY79     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3151794..3162537
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS16490 - 3152173..3153564 (+) 1392 WP_003233218.1 hypothetical protein -
  ABXV02_RS16495 sndC 3153637..3154827 (+) 1191 WP_003245681.1 N-acetyl amino acid acetylase SndC -
  ABXV02_RS16500 ecsC 3154845..3155555 (-) 711 WP_003233225.1 EcsC family protein -
  ABXV02_RS16505 ecsB 3155575..3156801 (-) 1227 WP_003245169.1 ABC transporter permease EcsB -
  ABXV02_RS16510 pptA 3156794..3157537 (-) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  ABXV02_RS16515 hinT 3158025..3158462 (+) 438 WP_003233231.1 HIT family protein -
  ABXV02_RS16520 serC 3158609..3159688 (+) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ABXV02_RS16525 trpP 3159813..3160331 (+) 519 WP_003233236.1 tryptophan transporter TrpP -
  ABXV02_RS16530 - 3160405..3160596 (-) 192 WP_003233238.1 hypothetical protein -
  ABXV02_RS16535 yhaH 3160726..3161082 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  ABXV02_RS16540 scoC 3161260..3161871 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  ABXV02_RS16545 yhaI 3161868..3162209 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=916033 ABXV02_RS16510 WP_003233230.1 3156794..3157537(-) (pptA) [Bacillus subtilis strain PY79]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=916033 ABXV02_RS16510 WP_003233230.1 3156794..3157537(-) (pptA) [Bacillus subtilis strain PY79]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547