Detailed information NTG0091602

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU36_RS10865
• Genome accession: NZ_AP025458
• Coordinates: 2433163..2436552 (+)
• Length: 1129 a.a.
• NCBI ID: WP_261838026.1
• Uniprot ID: -
• Organism: Vibrio artabrorum strain CECT 7226
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2428163..2441552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU36_RS10845	erpA	2428452..2428793 (-)	342	WP_261838022.1	iron-sulfur cluster insertion protein ErpA	-
OCU36_RS10850	hemL	2429090..2430385 (+)	1296	WP_261838023.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU36_RS10855	-	2430728..2431813 (+)	1086	WP_261838024.1	AI-2E family transporter	-
OCU36_RS10860	rsmC	2431924..2432946 (+)	1023	WP_261838025.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU36_RS10865	chiS	2433163..2436552 (+)	3390	WP_261838026.1	response regulator	Regulator
OCU36_RS10870	-	2437254..2438936 (+)	1683	WP_261838027.1	ABC transporter substrate-binding protein	-
OCU36_RS10875	-	2439105..2440091 (+)	987	WP_261838028.1	ABC transporter permease	-
OCU36_RS10880	-	2440094..2441119 (+)	1026	WP_261838029.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127281.97 Da
• Isoelectric Point: 6.0339

>NTDB_id=91602 OCU36_RS10865 WP_261838026.1 2433163..2436552(+) (chiS) [Vibrio artabrorum strain CECT 7226]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIIDYLEAQESQVMGFVRS
ELANASGGRFYGLVNAFQRLGLDIEEARSNAQQRYIQGSGNQIKTSILPESSSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKRDDYGTNLLTGKYKNSNLGETFRRLAKDVTKHRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKRSNIQTLLVGSDHLPRSLAHSQESINLSQYVVDKALAGETAVGTFDNTQGQA
FIAAYTPIKLKYATWALVVELPEKEAFARIHHLEKIFVIVMLTAIILVVVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
AMINTERKDEIGRLAVSFERMQRSIRDKMQLIKSQNDELEDNLKTIQKQNEDLQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPTDLALVSSDSQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPPEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDSYNESGSYSHFQAPDLIDSTQQENSVISENP
DGPLLVIADDEPVNLHVLDSFLKLEGYRVRTACDGPETIDLIKKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRIENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIVCIREDQRIRFANEAAAKLFKRGQEQLKRSTADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDAMTN
AIFYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPRTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=91602 OCU36_RS10865 WP_261838026.1 2433163..2436552(+) (chiS) [Vibrio artabrorum strain CECT 7226]
ATGTTTAGATTCTATCGAAAGCAGAAGTTTAAGCGTCTTCAAAACACCCTAATGCTGGCATTTCTCGTCCTTAGTATTAC
CCCGGTGACACTTATCGCGATATTTTTCCTTCAATCGCACAGTCAGGATCTTCAAGAACAAAGTACTTCGCACCTTGTTT
CAGTCCGTGATACTAAGCAACAGCAAATCATCGATTACCTAGAGGCTCAAGAGTCTCAAGTCATGGGGTTTGTTCGCTCA
GAACTGGCGAATGCCAGCGGAGGGCGATTCTATGGTTTAGTTAATGCATTCCAACGACTTGGTTTAGATATTGAAGAGGC
GCGCAGCAATGCACAACAACGGTATATTCAAGGGTCAGGAAACCAAATAAAAACATCCATTCTTCCAGAATCCAGCAGCT
TCATTGGCAGTGAACGTTACCGTCTACTGCACAAACGCTACCACAATGCTTACCTAGAGCTCCTTAAACGTTCCGATTTT
GACGATATCTTACTCGTGGATATCAATGGCAATGTTGCCTATTCCGTTTTTAAACGTGATGACTATGGCACCAACTTACT
GACGGGAAAATACAAAAATTCAAACTTAGGCGAGACCTTTCGACGACTAGCAAAAGACGTGACCAAGCATCGTAAGTCCA
ATGAGGATTACACTCCCGTTATTGTCTCTGATTTTAAAGATGAAAATGGCAAACAAACCGCTTGGTTGGGCGCTCCCATC
GTACAGCAAGGTTACCTTCACAGTTATGCCATGTTTCGATTACCCATTAACGGAATTACCAAACTGATCGCCGACTTAAA
TAAGCGTTCAAATATTCAAACCCTATTGGTCGGCAGCGATCATTTACCTCGTAGCCTTGCGCACTCACAAGAGTCGATCA
ACTTAAGTCAATATGTTGTCGATAAAGCACTGGCCGGAGAGACAGCTGTAGGAACGTTCGATAACACGCAAGGTCAAGCG
TTCATCGCAGCATATACCCCTATCAAACTAAAATATGCGACATGGGCTTTAGTCGTCGAACTGCCTGAGAAAGAAGCCTT
TGCTCGTATTCATCACCTCGAAAAAATCTTCGTGATTGTGATGCTAACAGCGATCATTCTTGTGGTGGTCGCATCACACT
ACTTATCCAATTTTATCACTTCACCGCTTCTCAAACTGACTTGGGCAGCAGAAAAAGTTTCCGCAGGCGATCTCGATGAG
GCGATGATCAATACAGAGCGCAAAGATGAGATAGGCCGCTTAGCGGTAAGCTTTGAACGGATGCAACGTTCGATTCGCGA
CAAAATGCAACTGATCAAAAGCCAAAATGATGAGCTGGAAGACAACCTAAAAACCATTCAAAAGCAAAACGAAGATTTGC
AGCTTGCCAACAAGCTCAAAGATGAGTTCTTAGCAACAACCTCACATGAATTGAGAACACCTTTACACGGTATGGTCGGT
ATCGCAGAGGCACTAATATCGGGCGCCAACGGCCCTATTCCTGCTAACCAAAAATACCAATTAGACATCATCATCAATAG
TGGTCAGAGATTAGCAACCTTGGTTGATGATCTGCTTGATTATCACAAGATGCGCTACGGCAGTTTAGATATTAAGAAGT
CCGCTGTTGATTTATCGGCCGCCACCAGCTTAGTACTTGAACTGTCACATCATCTATTAGGCAATAAGCCGATTCGAATT
ATTAATCAAGTTCCAACGGACTTAGCGTTAGTATCGTCCGACTCTCAACGACTGGAACAAGTGATGTATAACTTGGTTGG
CAATGCCATTAAGTACACATCAGAAGGAAAAATCGTTATCTCGGCCAGCGTGATTGACGACAATATTCGTGTACAAGTTG
TCGATACCGGGCAAGGTATACCACCAGAATATCTTGAACATATTTTTGAGCCGTTAATTCAAGCGGGTCAAGATGCAAGT
AACTACCGTCAAGGTGCTGGACTGGGGTTATCCATTAGCCGCCAATTGATTGAACTCATGGGGGGCTCATTGTATGTCAG
CAGTCAGCCAATGCTAGGCACAACTTTCAGCTTCACATTACCTTTAGCCACCCAAGAAGAATTAGATAGCTACAATGAAT
CAGGGAGCTACTCGCACTTCCAAGCACCCGATCTGATTGATAGTACCCAACAAGAAAACAGTGTTATCAGTGAAAATCCC
GATGGCCCACTACTCGTTATCGCTGATGATGAGCCGGTAAATCTGCACGTGTTAGACAGCTTTTTGAAATTAGAAGGTTA
TCGAGTTCGTACCGCTTGTGATGGACCAGAAACCATAGACCTGATTAAAAAAGAGAAACCTGAATTGCTTCTACTCGACA
TCATGATGCCGGGGATGAGTGGCTATCAGGTTTGTGAAGCGCTGCGTAAGCAATATGATCATGCACAATTACCCATCATC
ATGCTTACCGCACTCAACCAAGCAGAAGACCGAGTTCGTGGCTTTGAAGCAGGAGCCAACGATTACTTATCGAAGCCATT
TAATAAGCAAGAACTGGCTGCTCGAATTACTGCGCATTTATCAGCGAGCAAAGCCGAACAGCGGCGTATTGAGAATGACC
AACTGCAATTAGAACTCAAACACCGAGCCATGGTCGAAGCAAACTTGTTAGAGACCCAAGGACGCTTACTGGAACAGTTA
GAATCAGCCCCAGAAGCCATCGTCTGCATTCGAGAAGATCAACGTATTCGCTTTGCCAACGAAGCCGCGGCGAAGCTCTT
TAAACGCGGACAAGAGCAACTTAAGCGCTCTACGGCCGACGAAATCATTGCACCTAAATACCTCAAGGTGGAGCAAGCTC
ATTACTGTGGTGATATTGATATCTATATTGATGACACCCGTCAGCGCATACCAAGTGACATCCTTAAGCTTCCTGAAGGA
TCAGGGCTCGACACCATGTATATCTTCAATGTGGGTGGTGGCGTTAACTCCAACCGAGTCAATAATCTTGAAACGGCGGT
TGAGGCACTGTCAAGCTATGCCTTTGAAGGTGACAAAGACAAGCTACAACAACTGAAAGAGCTTGGTGGGGAATTTACTC
GTCTTGCTGATAAGGCGACGGGGGAAGGTAAAAACAAACAAGAGTTGATGCGAGAAGTATTAGTTGATGCCATGACCAAT
GCCATCTTTTATTGGGAATCGGTCACGGGTGAAACAAAGTTTGCTTTCGCAGAAAAGAGTGGCTTGTGGCGTGTCTACTT
AGACCGCAGTACGCTTCAGACCCGAACCTTAGACAAGTACCTACGTGTCGAAACCCTGCCAAGAACGCCTCGCTGGAGAA
CAGTTCTGAGTTCTATCGAGTTCATTCTCGAACACTGTAAAGAACAGACCCCAGAAAGAACTCATATCGAGATGCTAAGA
GATAAACTGCAAAGACTGTTGACCAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.262	100	0.763