Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ABXV02_RS04315 Genome accession   NZ_CP159912
Coordinates   808101..808814 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain PY79     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 803101..813814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXV02_RS04280 rppI 803347..803823 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  ABXV02_RS04285 rapZ 803848..804735 (+) 888 WP_003243903.1 RNase adapter RapZ -
  ABXV02_RS04290 mgfK 804737..805690 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  ABXV02_RS04295 whiA 805713..806663 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  ABXV02_RS04300 crh 806687..806944 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ABXV02_RS04305 yvcN 806945..807709 (+) 765 WP_009968228.1 arylamine N-acetyltransferase -
  ABXV02_RS04310 yvzJ 807745..807954 (-) 210 WP_003243327.1 lipoprotein -
  ABXV02_RS04315 braR 808101..808814 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  ABXV02_RS04320 psdS 808808..809878 (+) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  ABXV02_RS04325 psdA 809961..810740 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ABXV02_RS04330 psdB 810715..812655 (+) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  ABXV02_RS04335 ghrB 812693..813670 (-) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=915936 ABXV02_RS04315 WP_003244535.1 808101..808814(+) (braR) [Bacillus subtilis strain PY79]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=915936 ABXV02_RS04315 WP_003244535.1 808101..808814(+) (braR) [Bacillus subtilis strain PY79]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43