Detailed information NTG0091550

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK02_RS21935
• Genome accession: NZ_AP027889
• Coordinates: 4497961..4498986 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2018-06-4CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4492961..4503986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK02_RS21915 (VEE72_41910)	metJ	4494022..4494339 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABK02_RS21920 (VEE72_41920)	yiiX	4494523..4495131 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK02_RS21925 (VEE72_41930)	rpmE	4495192..4495404 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK02_RS21930 (VEE72_41940)	priA	4495607..4497805 (+)	2199	WP_032173122.1	primosomal protein N'	Machinery gene
AABK02_RS21935 (VEE72_41950)	cytR	4497961..4498986 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK02_RS21940 (VEE72_41960)	ftsN	4499078..4500037 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABK02_RS21945 (VEE72_41970)	hslV	4500130..4500660 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK02_RS21950 (VEE72_41980)	hslU	4500670..4502001 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK02_RS21955 (VEE72_41990)	menA	4502068..4502994 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK02_RS21960 (VEE72_42000)	rraA	4503087..4503572 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK02_RS21965 (VEE72_42010)	zapB	4503657..4503902 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91550 AABK02_RS21935 WP_000644904.1 4497961..4498986(+) (cytR) [Escherichia coli strain 2018-06-4CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91550 AABK02_RS21935 WP_000644904.1 4497961..4498986(+) (cytR) [Escherichia coli strain 2018-06-4CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
AGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCAATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628