Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   U5U22_RS16020 Genome accession   NZ_CP140728
Coordinates   2781713..2782459 (+) Length   248 a.a.
NCBI ID   WP_000487010.1    Uniprot ID   Q81LT9
Organism   Bacillus anthracis strain MH-PR     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 2776713..2787459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U5U22_RS15990 (U5U22_15990) - 2777002..2779146 (+) 2145 WP_000946454.1 HD family phosphohydrolase -
  U5U22_RS15995 (U5U22_15995) ybeY 2779143..2779613 (+) 471 WP_000054692.1 rRNA maturation RNase YbeY -
  U5U22_RS16000 (U5U22_16000) - 2779610..2779963 (+) 354 WP_000715480.1 diacylglycerol kinase family protein -
  U5U22_RS16005 (U5U22_16005) - 2780063..2780461 (+) 399 WP_001086294.1 cytidine deaminase -
  U5U22_RS16010 (U5U22_16010) era 2780454..2781359 (+) 906 WP_001080240.1 GTPase Era -
  U5U22_RS16015 (U5U22_16015) - 2781536..2781679 (+) 144 WP_000883924.1 YqzL family protein -
  U5U22_RS16020 (U5U22_16020) recO 2781713..2782459 (+) 747 WP_000487010.1 DNA repair protein RecO Machinery gene
  U5U22_RS16025 (U5U22_16025) - 2782567..2783199 (+) 633 WP_000583758.1 helix-turn-helix transcriptional regulator -
  U5U22_RS16030 (U5U22_16030) - 2783229..2784041 (+) 813 WP_000368943.1 pyruvate, water dikinase regulatory protein -
  U5U22_RS16035 (U5U22_16035) - 2784409..2784564 (+) 156 WP_003158471.1 hypothetical protein -
  U5U22_RS16040 (U5U22_16040) dnaG 2784895..2786691 (+) 1797 WP_000528217.1 DNA primase -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 28665.22 Da        Isoelectric Point: 8.0540

>NTDB_id=915221 U5U22_RS16020 WP_000487010.1 2781713..2782459(+) (recO) [Bacillus anthracis strain MH-PR]
MFQKVEGIVIRTTDYGETNKIVTIFSRELGKVSAMARGAKKPKSRLASVSQLMTHGHFLIQMGSGLGTLQQGEIISTMKE
IREDIFLTAYASFIVELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMRPYFDTCAICHQETD
FVAFSVREGGFLCSRHAEQDQYRIPVGEAVHKLLRLFYHFDLHRLGNVSVKDSTKKQMRLVLNTYYDEYCGIYLKSRRFL
EQLDKFQI

Nucleotide


Download         Length: 747 bp        

>NTDB_id=915221 U5U22_RS16020 WP_000487010.1 2781713..2782459(+) (recO) [Bacillus anthracis strain MH-PR]
ATGTTTCAAAAAGTTGAGGGCATCGTTATCCGTACGACAGATTACGGAGAAACGAACAAGATTGTTACAATATTTTCAAG
AGAATTGGGTAAGGTAAGTGCAATGGCAAGAGGAGCGAAAAAACCGAAAAGTCGGTTAGCGTCTGTTTCGCAACTTATGA
CACATGGTCATTTTCTTATTCAAATGGGATCTGGACTTGGAACTTTGCAACAAGGCGAGATTATTTCAACTATGAAAGAA
ATTCGCGAGGATATATTTTTAACTGCTTATGCATCATTTATTGTTGAATTAACTGATAAAGCAACAGAAGATAAAAAACA
TAATCCATATTTATTTGAAATGTTATATCAAACGTTGCATTATATGTGTGAGGGTGTTGATCCAGAAGTATTATCATTAA
TTTATCAAACGAAAATGCTTCCGGTATTAGGGATGCGCCCGTACTTTGACACATGTGCGATTTGTCATCAAGAAACAGAT
TTTGTCGCCTTCTCTGTTAGAGAGGGCGGTTTTCTGTGCTCACGTCATGCTGAGCAAGATCAGTATCGTATACCAGTGGG
GGAAGCCGTTCATAAATTATTGCGTCTTTTCTACCACTTCGATTTACATAGACTTGGCAATGTATCAGTGAAGGATAGCA
CAAAAAAACAAATGCGTTTAGTATTGAATACATATTATGATGAATATTGCGGGATTTATTTGAAATCAAGACGTTTCTTA
GAACAACTTGATAAGTTTCAAATATAA

Domains

Predicted by InterproScan.

Recombination protein O C terminal (RecO_C)

(82-238)

Recombination protein O N terminal (RecO_N)

(1-77)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q81LT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

55.466

99.597

0.552