Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ABYM97_RS04305 Genome accession   NZ_CP159874
Coordinates   807892..808605 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain PY79     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 802892..813605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABYM97_RS04270 (ABYM97_04270) rppI 803138..803614 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  ABYM97_RS04275 (ABYM97_04275) rapZ 803639..804526 (+) 888 WP_003243903.1 RNase adapter RapZ -
  ABYM97_RS04280 (ABYM97_04280) mgfK 804528..805481 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  ABYM97_RS04285 (ABYM97_04285) whiA 805504..806454 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  ABYM97_RS04290 (ABYM97_04290) crh 806478..806735 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ABYM97_RS04295 (ABYM97_04295) yvcN 806736..807500 (+) 765 WP_009968228.1 arylamine N-acetyltransferase -
  ABYM97_RS04300 (ABYM97_04300) yvzJ 807536..807745 (-) 210 WP_003243327.1 lipoprotein -
  ABYM97_RS04305 (ABYM97_04305) braR 807892..808605 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  ABYM97_RS04310 (ABYM97_04310) psdS 808599..809669 (+) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  ABYM97_RS04315 (ABYM97_04315) psdA 809752..810531 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ABYM97_RS04320 (ABYM97_04320) psdB 810506..812446 (+) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  ABYM97_RS04325 (ABYM97_04325) ghrB 812484..813461 (-) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=915219 ABYM97_RS04305 WP_003244535.1 807892..808605(+) (braR) [Bacillus subtilis strain PY79]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=915219 ABYM97_RS04305 WP_003244535.1 807892..808605(+) (braR) [Bacillus subtilis strain PY79]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43