Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ABYM97_RS03260 | Genome accession | NZ_CP159874 |
| Coordinates | 603893..605026 (+) | Length | 377 a.a. |
| NCBI ID | WP_003227715.1 | Uniprot ID | P70962 |
| Organism | Bacillus subtilis strain PY79 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 598893..610026
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABYM97_RS03230 (ABYM97_03230) | ywmC | 599690..600373 (+) | 684 | WP_023592812.1 | VWA domain-containing protein | - |
| ABYM97_RS03235 (ABYM97_03235) | - | 600504..600644 (+) | 141 | WP_003227702.1 | hypothetical protein | - |
| ABYM97_RS03240 (ABYM97_03240) | ywmD | 600697..601371 (+) | 675 | WP_003243553.1 | VWA domain-containing protein | - |
| ABYM97_RS03245 (ABYM97_03245) | - | 601465..601626 (+) | 162 | WP_003227706.1 | hypothetical protein | - |
| ABYM97_RS03250 (ABYM97_03250) | fdhD | 601872..602660 (+) | 789 | WP_003227709.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| ABYM97_RS03255 (ABYM97_03255) | moaA | 602676..603701 (+) | 1026 | WP_003243488.1 | GTP 3',8-cyclase MoaA | - |
| ABYM97_RS03260 (ABYM97_03260) | rapC | 603893..605026 (+) | 1134 | WP_003227715.1 | response regulator aspartate phosphatase RapB | Regulator |
| ABYM97_RS03265 (ABYM97_03265) | - | 605182..605661 (+) | 480 | WP_003244390.1 | hypothetical protein | - |
| ABYM97_RS03270 (ABYM97_03270) | csbD | 605734..605922 (+) | 189 | WP_003227718.1 | stress response protein CsbD | - |
| ABYM97_RS03275 (ABYM97_03275) | - | 606134..606302 (+) | 169 | Protein_625 | urea ABC transporter substrate-binding protein | - |
| ABYM97_RS03280 (ABYM97_03280) | - | 606574..606738 (+) | 165 | WP_015649919.1 | hypothetical protein | - |
| ABYM97_RS03285 (ABYM97_03285) | ureA | 606919..607236 (+) | 318 | WP_003227724.1 | urease subunit gamma | - |
| ABYM97_RS03290 (ABYM97_03290) | ureB | 607233..607607 (+) | 375 | WP_003227726.1 | urease subunit beta | - |
| ABYM97_RS03295 (ABYM97_03295) | ureC | 607604..609313 (+) | 1710 | WP_003243090.1 | urease subunit alpha | - |
| ABYM97_RS03300 (ABYM97_03300) | ywnA | 609448..609849 (+) | 402 | WP_003227734.1 | Rrf2 family transcriptional regulator | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 45037.17 Da Isoelectric Point: 4.8005
>NTDB_id=915211 ABYM97_RS03260 WP_003227715.1 603893..605026(+) (rapC) [Bacillus subtilis strain PY79]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
Nucleotide
Download Length: 1134 bp
>NTDB_id=915211 ABYM97_RS03260 WP_003227715.1 603893..605026(+) (rapC) [Bacillus subtilis strain PY79]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAACTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCCGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAACTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCCGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
42.632 |
100 |
0.43 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.667 |
99.469 |
0.424 |