Detailed information NTG0915122

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: U6038_RS06720
• Genome accession: NZ_CP140715
• Coordinates: 1416930..1417550 (+)
• Length: 206 a.a.
• NCBI ID: WP_004984837.1
• Uniprot ID: A0A7H8SFP9
• Organism: Acinetobacter johnsonii strain FAHZZU3110hy
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1411930..1422550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U6038_RS06685 (U6038_06685)	kdsB	1412335..1413096 (+)	762	WP_205666743.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
U6038_RS06690 (U6038_06690)	-	1413116..1414099 (+)	984	WP_205666742.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
U6038_RS06695 (U6038_06695)	-	1414114..1414455 (+)	342	WP_333656308.1	PilZ domain-containing protein	-
U6038_RS06700 (U6038_06700)	-	1414482..1415255 (+)	774	WP_205666741.1	TatD family hydrolase	-
U6038_RS06705 (U6038_06705)	-	1415301..1415915 (+)	615	WP_004696845.1	TetR/AcrR family transcriptional regulator	-
U6038_RS06710 (U6038_06710)	-	1415928..1416497 (+)	570	WP_205666740.1	type II secretion system protein	-
U6038_RS06715 (U6038_06715)	xcpV	1416487..1416933 (+)	447	WP_333656313.1	type II secretion system minor pseudopilin GspI	Machinery gene
U6038_RS06720 (U6038_06720)	xcpW	1416930..1417550 (+)	621	WP_004984837.1	type II secretion system minor pseudopilin GspJ	Machinery gene
U6038_RS06725 (U6038_06725)	gspK	1417629..1418579 (+)	951	WP_333656316.1	type II secretion system minor pseudopilin GspK	-
U6038_RS06730 (U6038_06730)	-	1418702..1419298 (+)	597	WP_004696854.1	6-pyruvoyl trahydropterin synthase family protein	-
U6038_RS06735 (U6038_06735)	ung	1419340..1420053 (+)	714	WP_004696856.1	uracil-DNA glycosylase	-
U6038_RS06740 (U6038_06740)	-	1420050..1420772 (+)	723	Protein_1292	enoyl-CoA hydratase/isomerase family protein	-
U6038_RS06745 (U6038_06745)	-	1420791..1421492 (-)	702	WP_004841207.1	IS1 family transposase	-
U6038_RS06750 (U6038_06750)	-	1421551..1421967 (+)	417	Protein_1294	enoyl-CoA hydratase/isomerase family protein	-
U6038_RS06755 (U6038_06755)	tadA	1421973..1422473 (+)	501	WP_005401161.1	tRNA adenosine(34) deaminase TadA	-

Sequence

Protein

• Length: 206 a.a.
• Molecular weight: 23563.11 Da
• Isoelectric Point: 5.3491

>NTDB_id=915122 U6038_RS06720 WP_004984837.1 1416930..1417550(+) (xcpW) [Acinetobacter johnsonii strain FAHZZU3110hy]
MTKRSGFTLVELLVAIAIFAVLSALGWKVFDYLIKIKERNTQHEQRLGQLQEAYQQVLRDTVQIVPITANVAGQVQPAVM
LQNGQLTFSKTGVTDPLMQGIPPEERVEYIYKADEKKLYRYKYKNLNQTGNDQPETSVLLDSVDQFQIMLLNPNEMAQWP
EVALSENDVTQAKILPRGLKINLTVNEVSYEWVFSLLNTDFLKQKN

Nucleotide

• Length: 621 bp

>NTDB_id=915122 U6038_RS06720 WP_004984837.1 1416930..1417550(+) (xcpW) [Acinetobacter johnsonii strain FAHZZU3110hy]
ATGACAAAACGCTCAGGCTTTACTTTGGTTGAGTTATTGGTGGCAATCGCGATTTTTGCTGTGCTTTCAGCTTTGGGTTG
GAAGGTTTTTGATTATCTGATCAAGATTAAAGAGCGTAATACCCAACATGAACAACGCTTAGGTCAGCTACAAGAAGCAT
ATCAACAAGTGTTACGTGACACGGTGCAAATTGTACCAATTACTGCCAATGTTGCGGGGCAGGTTCAACCCGCAGTCATG
TTGCAAAATGGTCAGTTGACCTTTAGTAAAACTGGCGTGACTGATCCTTTAATGCAAGGCATACCGCCTGAAGAGCGAGT
TGAATATATTTATAAAGCAGATGAAAAAAAACTGTACCGTTATAAATATAAAAATTTAAATCAAACAGGTAATGATCAAC
CTGAAACCAGTGTTCTACTTGATTCAGTTGATCAATTTCAAATTATGCTACTCAATCCCAATGAAATGGCACAATGGCCT
GAGGTGGCATTGAGTGAAAATGATGTAACTCAGGCAAAAATACTACCGCGCGGTTTAAAAATAAACCTCACTGTCAATGA
AGTGAGTTATGAATGGGTGTTTAGTTTATTAAATACAGACTTTTTAAAACAAAAAAATTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-188)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

3D structure

• AlphaFold DB: A0A7H8SFP9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	58.706	97.573	0.573