Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U6037_RS27270 Genome accession   NZ_CP140706
Coordinates   6152837..6153241 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. B33.4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6147837..6158241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U6037_RS27255 - 6149668..6151716 (-) 2049 WP_123454282.1 methyl-accepting chemotaxis protein -
  U6037_RS27260 - 6151861..6152400 (-) 540 WP_007913675.1 chemotaxis protein CheW -
  U6037_RS27265 pilH 6152411..6152776 (-) 366 WP_007913674.1 twitching motility response regulator PilH -
  U6037_RS27270 pilG 6152837..6153241 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  U6037_RS27275 gshB 6153467..6154438 (+) 972 WP_322845133.1 glutathione synthase -
  U6037_RS27280 - 6154545..6155444 (+) 900 WP_322845134.1 energy transducer TonB -
  U6037_RS27285 - 6155617..6156189 (+) 573 WP_008077846.1 YqgE/AlgH family protein -
  U6037_RS27290 ruvX 6156189..6156626 (+) 438 WP_064589634.1 Holliday junction resolvase RuvX -
  U6037_RS27295 pyrR 6156707..6157213 (+) 507 WP_322845135.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=915051 U6037_RS27270 WP_007913673.1 6152837..6153241(-) (pilG) [Pseudomonas sp. B33.4]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=915051 U6037_RS27270 WP_007913673.1 6152837..6153241(-) (pilG) [Pseudomonas sp. B33.4]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACCTTGTT
GAAGAATGTCGGGTGCGAAGTAATCACGGCGATCGACGGTTTCGACGCTTTGGCGAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACACCGGTGATCATGTTGTCATCGCGAGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAGTT
TTTGACCAAGCCGTTCAGCAAGGAAGAGCTGCTCAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701